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The map label for this gene is 18978165

Identifier: 18978165

GI number: 18978165

Start: 1665560

End: 1666189

Strand: Reverse

Name: 18978165

Synonym: PF1793

Alternate gene names: NA

Gene position: 1666189-1665560 (Counterclockwise)

Preceding gene: 18978171

Following gene: 18978160

Centisome position: 87.31

GC content: 37.46

Gene sequence:

>630_bases
ATGATAGAATTTTATGCGAGTGAAGCTTTAATATGTCCAAGAAGGGTTTGGTTTAGAATTAAAGGTTTTCCAGAAAAATG
GCCCGAGATAGCTATTCCCAGGTTGAACAAAGGGGTAAAGACCCATGAAGTTATGGGTAAAATTCTGAGGGACGAATTTG
GTTTTGAATTGGAAAAGCACATGATACTAAGGTTTCCTAGGTTGGGATTTGAGATTCATGGGAGAATGGATGCATACAAG
GAATTTCCTATTGAGATTAAAGGGAAGTCCATTCTTCCTAGATTTCCTCTTGAATATCACTTGGCTCAGCTTAACATATA
TTTGAGGTGGGCCGAAGCTGAGCGTGGATTCATTTATTATGTAAAACTTCACGATAATCCAGAGAGGATTGTAGAAAGCA
TTGATTTTAGAGGGTTTCCAAGAATTAAGGGAAAACACCTTAGGGTATTCGAAGTTCCCTACGATGGAACGCTATTTAAG
GAGACTGTGAAATTCTTCTATGAACTTAAATTGTATATAAAAGAGGATTCTCTCCCACCAGCTTGGAAAGGGCCTTCATG
TAAGTTTTGTCCATATAATTACCTTTGCTCACAGTCTTTCTTGTCTTTCTATAGTGAAAAGACGTTATAA

Upstream 100 bases:

>100_bases
AAAAACACTTACGGTATAGAGGATTAGCGGATGATGTGCCTTGCCCAGCCTGAAAGGTGATGATGTCGGTATTAGCTGAC
GCTTTTCCGGAGGGAAATAA

Downstream 100 bases:

>100_bases
AAATGGACATCAATGTCCTCATTGCTCACTTCTAATATAGCGAATGTAGGCTCGCTCATCCTGGGAAGGGTTGGTGAGCC
GGGATTTAACAAAATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MIEFYASEALICPRRVWFRIKGFPEKWPEIAIPRLNKGVKTHEVMGKILRDEFGFELEKHMILRFPRLGFEIHGRMDAYK
EFPIEIKGKSILPRFPLEYHLAQLNIYLRWAEAERGFIYYVKLHDNPERIVESIDFRGFPRIKGKHLRVFEVPYDGTLFK
ETVKFFYELKLYIKEDSLPPAWKGPSCKFCPYNYLCSQSFLSFYSEKTL

Sequences:

>Translated_209_residues
MIEFYASEALICPRRVWFRIKGFPEKWPEIAIPRLNKGVKTHEVMGKILRDEFGFELEKHMILRFPRLGFEIHGRMDAYK
EFPIEIKGKSILPRFPLEYHLAQLNIYLRWAEAERGFIYYVKLHDNPERIVESIDFRGFPRIKGKHLRVFEVPYDGTLFK
ETVKFFYELKLYIKEDSLPPAWKGPSCKFCPYNYLCSQSFLSFYSEKTL
>Mature_209_residues
MIEFYASEALICPRRVWFRIKGFPEKWPEIAIPRLNKGVKTHEVMGKILRDEFGFELEKHMILRFPRLGFEIHGRMDAYK
EFPIEIKGKSILPRFPLEYHLAQLNIYLRWAEAERGFIYYVKLHDNPERIVESIDFRGFPRIKGKHLRVFEVPYDGTLFK
ETVKFFYELKLYIKEDSLPPAWKGPSCKFCPYNYLCSQSFLSFYSEKTL

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25049; Mature: 25049

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFYASEALICPRRVWFRIKGFPEKWPEIAIPRLNKGVKTHEVMGKILRDEFGFELEKH
CEEEECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
MILRFPRLGFEIHGRMDAYKEFPIEIKGKSILPRFPLEYHLAQLNIYLRWAEAERGFIYY
HHHHCCCCCEEEECCCCHHHCCCEEECCCCCCCCCCHHEEEEEEEEEEEEEECCCCEEEE
VKLHDNPERIVESIDFRGFPRIKGKHLRVFEVPYDGTLFKETVKFFYELKLYIKEDSLPP
EEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCC
AWKGPSCKFCPYNYLCSQSFLSFYSEKTL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEFYASEALICPRRVWFRIKGFPEKWPEIAIPRLNKGVKTHEVMGKILRDEFGFELEKH
CEEEECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
MILRFPRLGFEIHGRMDAYKEFPIEIKGKSILPRFPLEYHLAQLNIYLRWAEAERGFIYY
HHHHCCCCCEEEECCCCHHHCCCEEECCCCCCCCCCHHEEEEEEEEEEEEEECCCCEEEE
VKLHDNPERIVESIDFRGFPRIKGKHLRVFEVPYDGTLFKETVKFFYELKLYIKEDSLPP
EEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCC
AWKGPSCKFCPYNYLCSQSFLSFYSEKTL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA