Click here to switch to the map view.

The map label for this gene is yfcE [C]

Identifier: 18978164

GI number: 18978164

Start: 1665087

End: 1665581

Strand: Direct

Name: yfcE [C]

Synonym: PF1792

Alternate gene names: 18978164

Gene position: 1665087-1665581 (Clockwise)

Preceding gene: 18978163

Following gene: 18978166

Centisome position: 87.26

GC content: 35.76

Gene sequence:

>495_bases
ATGAAAGTTGGAGTGCTTAGTGACACCCACATTCCTAAAGCATATTTTCCTCCTCAAATATTTGAATTTTTAAAGAAGAG
AAACGTTCAGTACATTATTCATGCAGGAGATATAACGAGTAAAGAGTTTTTAGAAAAGTTAGAGGAAGTAGCTCCAGTGA
TCGCAGTTAAGGGGAATATGGATAGAATTGATTTACCAGAAGAAGAAAAAATCGAAATTGGAAATTTCTCAATACTAATT
TTACATGGACACCAGTTTCTCTCGCTAAACTTAGATAATTTAACTTACAAAGCCTTAGAAGAAGAGGTTGATATACTCGT
TTTTGGACACACTCATAGGCCTTACTATAACGTAGTTAGAAGCTATGGTCGTGAAATAATTTTGTTAAATCCCGGCTCAC
CAACCCTTCCCAGGATGAGCGAGCCTACATTCGCTATATTAGAAGTGAGCAATGAGGACATTGATGTCCATTTTTATAAC
GTCTTTTCACTATAG

Upstream 100 bases:

>100_bases
TGTAGATGAGAGAAAGAGAAAAGAATCTCCTAAAAAGAATAAGGAGAAGAGGATGAAAAAGAAGAAAAGGCTGAATAGAT
GATGAGAGGGGACCTCTCTG

Downstream 100 bases:

>100_bases
AAAGACAAGAAAGACTGTGAGCAAAGGTAATTATATGGACAAAACTTACATGAAGGCCCTTTCCAAGCTGGTGGGAGAGA
ATCCTCTTTTATATACAATT

Product: 5'-cyclic-nucleotide phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKVGVLSDTHIPKAYFPPQIFEFLKKRNVQYIIHAGDITSKEFLEKLEEVAPVIAVKGNMDRIDLPEEEKIEIGNFSILI
LHGHQFLSLNLDNLTYKALEEEVDILVFGHTHRPYYNVVRSYGREIILLNPGSPTLPRMSEPTFAILEVSNEDIDVHFYN
VFSL

Sequences:

>Translated_164_residues
MKVGVLSDTHIPKAYFPPQIFEFLKKRNVQYIIHAGDITSKEFLEKLEEVAPVIAVKGNMDRIDLPEEEKIEIGNFSILI
LHGHQFLSLNLDNLTYKALEEEVDILVFGHTHRPYYNVVRSYGREIILLNPGSPTLPRMSEPTFAILEVSNEDIDVHFYN
VFSL
>Mature_164_residues
MKVGVLSDTHIPKAYFPPQIFEFLKKRNVQYIIHAGDITSKEFLEKLEEVAPVIAVKGNMDRIDLPEEEKIEIGNFSILI
LHGHQFLSLNLDNLTYKALEEEVDILVFGHTHRPYYNVVRSYGREIILLNPGSPTLPRMSEPTFAILEVSNEDIDVHFYN
VFSL

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Homo sapiens, GI7706441, Length=174, Percent_Identity=28.1609195402299, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI17402912, Length=170, Percent_Identity=27.6470588235294, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 18855; Mature: 18855

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGVLSDTHIPKAYFPPQIFEFLKKRNVQYIIHAGDITSKEFLEKLEEVAPVIAVKGNM
CEECCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEEECCCC
DRIDLPEEEKIEIGNFSILILHGHQFLSLNLDNLTYKALEEEVDILVFGHTHRPYYNVVR
CCCCCCCCCEEEECCEEEEEEECCEEEEEECCCCCHHHHHCCCCEEEEECCCCHHHHHHH
SYGREIILLNPGSPTLPRMSEPTFAILEVSNEDIDVHFYNVFSL
HCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MKVGVLSDTHIPKAYFPPQIFEFLKKRNVQYIIHAGDITSKEFLEKLEEVAPVIAVKGNM
CEECCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEEECCCC
DRIDLPEEEKIEIGNFSILILHGHQFLSLNLDNLTYKALEEEVDILVFGHTHRPYYNVVR
CCCCCCCCCEEEECCEEEEEEECCEEEEEECCCCCHHHHHCCCCEEEEECCCCHHHHHHH
SYGREIILLNPGSPTLPRMSEPTFAILEVSNEDIDVHFYNVFSL
HCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]