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The map label for this gene is 18978139

Identifier: 18978139

GI number: 18978139

Start: 1644004

End: 1644264

Strand: Direct

Name: 18978139

Synonym: PF1767

Alternate gene names: NA

Gene position: 1644004-1644264 (Clockwise)

Preceding gene: 18978136

Following gene: 18978140

Centisome position: 86.15

GC content: 41.76

Gene sequence:

>261_bases
GTGGGGGAAAATGTCCAAATTAATAAAGATGGCTATCTCGTTATTGGAAAAACAAACGCCGTTGAGATCAGTATTGATAC
TTTTCTCTGCAAAGGATGCGGAATATGTGTAGAAATGTGTCCCAGGAAGGTTTTTGAATGGAGCAAAGAGCTCAGTGAAA
AGGGTGTCCACTATCCAATCCCAGTTCATGCAGATAAATGCGTAAGGTGTAAGCTCTGTGAATTATTGTGTCCAGACTTC
GCCATTGCAGTTAGGTGGTAG

Upstream 100 bases:

>100_bases
CATTATTAATACTCATGATCATTGTCCCTTTTTTGAACATCAATGCCCATTTACGAAAGCTTTAAATGTTTACAAATGTA
AACTCTGAAGGGGATTACAA

Downstream 100 bases:

>100_bases
AAATGATAATAAGGGGAGATGAACCTGAACAAAAAGCCCTTCTTAGAAAATTGTATAGAGCGGGCAATTATTTCATGATG
GGAGATGAGGCCATAGCTTA

Product: 2-keto acid:ferredoxin oxidoreductase subunit delta

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MGENVQINKDGYLVIGKTNAVEISIDTFLCKGCGICVEMCPRKVFEWSKELSEKGVHYPIPVHADKCVRCKLCELLCPDF
AIAVRW

Sequences:

>Translated_86_residues
MGENVQINKDGYLVIGKTNAVEISIDTFLCKGCGICVEMCPRKVFEWSKELSEKGVHYPIPVHADKCVRCKLCELLCPDF
AIAVRW
>Mature_85_residues
GENVQINKDGYLVIGKTNAVEISIDTFLCKGCGICVEMCPRKVFEWSKELSEKGVHYPIPVHADKCVRCKLCELLCPDFA
IAVRW

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.3

Molecular weight: Translated: 9691; Mature: 9559

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGENVQINKDGYLVIGKTNAVEISIDTFLCKGCGICVEMCPRKVFEWSKELSEKGVHYPI
CCCCEEECCCCEEEEECCCEEEEEHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PVHADKCVRCKLCELLCPDFAIAVRW
CCCCCCHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
GENVQINKDGYLVIGKTNAVEISIDTFLCKGCGICVEMCPRKVFEWSKELSEKGVHYPI
CCCEEECCCCEEEEECCCEEEEEHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PVHADKCVRCKLCELLCPDFAIAVRW
CCCCCCHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]