Click here to switch to the map view.

The map label for this gene is 18978136

Identifier: 18978136

GI number: 18978136

Start: 1641930

End: 1642607

Strand: Direct

Name: 18978136

Synonym: PF1764

Alternate gene names: NA

Gene position: 1641930-1642607 (Clockwise)

Preceding gene: 18978134

Following gene: 18978139

Centisome position: 86.04

GC content: 44.54

Gene sequence:

>678_bases
ATGGTGAAAGTAACATTTCTCGGACACGCAGCTTTCTACATAGAGGGAAGCAAAAAAATCCTAATAGACCCATTCCTAAG
CGGAAATCCAGTCGCAAGCGCTAAGCCAGACGACTTTAAGAGTGTAGACCTAATTTTAGTCACCCACGCCCATGGAGACC
ACCTCGGAGATGTCGGAACTATAGCTAAGAGAACAGGAGCAAAGGTTGTTGCAATGTATGATCTGGCAAACTACATAGCA
GAGAAGTACAAGGGAGTTGAGACAATAGGGATGAACTATGGACCCACTAAGGTCGATGAAGTGGAGATAGTTCAAGTTCC
TGCTTGGCATTCAAGTAGCGATGGAAAGTACAGCATAGGAAACGCCTGTGGGTACATAGTGAAGCTCGACGGAGTAACAA
TATACCACGCTGGAGATACCTACGTATTCAAAGACATGGAGTTATTTGCAGAGCTATATGGCCCAATTGACGTTGCTCTA
CTTCCAATAGGTGGTCACTTCACAATGGGTGTTAGAGAAGCAGCAAAAGCTGTTGAACTCCTAAAGCCAAGACATGTCAT
CCCAATGCATTACAACACCTGGCCACCTATTGCTGCTGATCCAGAAGAGTTCAAGAAGTTGGTAGGAGAAAAAGCAAAGG
TTGTCATTCTAAAACCAGGGGAATCTTTAGAGCTCTAA

Upstream 100 bases:

>100_bases
ACCCTCAGAACTTCTAAAAGATAGAAAATTAGAACTTTTATAAAGCTAACCACGAAAAGTTTATAGTAAGCTTTTGTTAT
TATATTCCTGGGTGGTGGAG

Downstream 100 bases:

>100_bases
TTTCTCTATCACTTCTTTCTTCGTAATTCCTTTTATAAGGAGATCTTTCTCTCTAGAGGTTTCACCTCTTACTATAACAA
CTTCTGCCCCGAAAAGTTTT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVKVTFLGHAAFYIEGSKKILIDPFLSGNPVASAKPDDFKSVDLILVTHAHGDHLGDVGTIAKRTGAKVVAMYDLANYIA
EKYKGVETIGMNYGPTKVDEVEIVQVPAWHSSSDGKYSIGNACGYIVKLDGVTIYHAGDTYVFKDMELFAELYGPIDVAL
LPIGGHFTMGVREAAKAVELLKPRHVIPMHYNTWPPIAADPEEFKKLVGEKAKVVILKPGESLEL

Sequences:

>Translated_225_residues
MVKVTFLGHAAFYIEGSKKILIDPFLSGNPVASAKPDDFKSVDLILVTHAHGDHLGDVGTIAKRTGAKVVAMYDLANYIA
EKYKGVETIGMNYGPTKVDEVEIVQVPAWHSSSDGKYSIGNACGYIVKLDGVTIYHAGDTYVFKDMELFAELYGPIDVAL
LPIGGHFTMGVREAAKAVELLKPRHVIPMHYNTWPPIAADPEEFKKLVGEKAKVVILKPGESLEL
>Mature_225_residues
MVKVTFLGHAAFYIEGSKKILIDPFLSGNPVASAKPDDFKSVDLILVTHAHGDHLGDVGTIAKRTGAKVVAMYDLANYIA
EKYKGVETIGMNYGPTKVDEVEIVQVPAWHSSSDGKYSIGNACGYIVKLDGVTIYHAGDTYVFKDMELFAELYGPIDVAL
LPIGGHFTMGVREAAKAVELLKPRHVIPMHYNTWPPIAADPEEFKKLVGEKAKVVILKPGESLEL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1764_PYRFU (Q8U053)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579493.1
- ProteinModelPortal:   Q8U053
- EnsemblBacteria:   EBPYRT00000004378
- GeneID:   1469643
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1764
- NMPDR:   fig|186497.1.peg.1814
- GeneTree:   EBGT00050000022821
- HOGENOM:   HBG741314
- OMA:   FPIIDQT
- ProtClustDB:   PRK00685
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 24513; Mature: 24513

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVTFLGHAAFYIEGSKKILIDPFLSGNPVASAKPDDFKSVDLILVTHAHGDHLGDVGT
CEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHH
IAKRTGAKVVAMYDLANYIAEKYKGVETIGMNYGPTKVDEVEIVQVPAWHSSSDGKYSIG
HHHHCCCEEEEEHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEECC
NACGYIVKLDGVTIYHAGDTYVFKDMELFAELYGPIDVALLPIGGHFTMGVREAAKAVEL
CCEEEEEEECCEEEEECCCEEEEHHHHHHHHHCCCEEEEEEEECCCEEHHHHHHHHHHHH
LKPRHVIPMHYNTWPPIAADPEEFKKLVGEKAKVVILKPGESLEL
HCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MVKVTFLGHAAFYIEGSKKILIDPFLSGNPVASAKPDDFKSVDLILVTHAHGDHLGDVGT
CEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHH
IAKRTGAKVVAMYDLANYIAEKYKGVETIGMNYGPTKVDEVEIVQVPAWHSSSDGKYSIG
HHHHCCCEEEEEHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEECC
NACGYIVKLDGVTIYHAGDTYVFKDMELFAELYGPIDVALLPIGGHFTMGVREAAKAVEL
CCEEEEEEECCEEEEECCCEEEEHHHHHHHHHCCCEEEEEEEECCCEEHHHHHHHHHHHH
LKPRHVIPMHYNTWPPIAADPEEFKKLVGEKAKVVILKPGESLEL
HCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA