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The map label for this gene is 18978115

Identifier: 18978115

GI number: 18978115

Start: 1619071

End: 1620087

Strand: Direct

Name: 18978115

Synonym: PF1743

Alternate gene names: NA

Gene position: 1619071-1620087 (Clockwise)

Preceding gene: 18978114

Following gene: 18978116

Centisome position: 84.85

GC content: 38.45

Gene sequence:

>1017_bases
ATGGAGATTCCCCCAGAAATTTCACATGCTTTGAGTGAGATTGGATTTACAAAGTATGAAATCCTCACTTACTGGACTCT
CTTGGTTTATGGGCCCAGTACTGCGAAGGAAATATCCACAAAAAGCGGGATTCCATACAACAGGGTCTATGATACAATAT
CCTCCTTAAAACTTAGAGGATTTGTGACTGAAATTGAAGGGACACCAAAGGTATACGCTGCCTACTCACCAAGAATAGCA
TTTTTCAGGTTCAAAAAAGAACTCGAAGACATAATGAAAAAGCTCGAAATTGAGCTTAATAATGTAAAAAAGGAAGAACA
GAGACCTGCAATATGGAGGAGCAGGAGTTTTGACGAAGCCATTGAGATGTTCAGAGAGTCACTCTATTCAGCTAAAAATG
AGGTTATAGTAGTTACTCCAAGCGAATTCTTTGAAACAATAAGAGAAGATTTGATCAAAACTCTCGAGAGAGGTGTAACG
GTGTCCCTCTATATCGACAAAATCCCGGATCTATCAGAGTTCAAAGGGAAAGGGAATTTCTTTGTTAGGCAGTTCTACAA
GCTGAACCACTTAATAGGCATGACTGATGGAAAAGAGGTAGTCACAATTCAGAATGCCACTTTTGACTCTATTGGACCTC
CTTCATTTAAGTCCACTTATCCTGAGATAATATTCTCCCAATACAGTCTCATAATAGAAATTTTCAAGGAATCCACACTC
GAAAAAGAGATTATCGGCAATCCAAAAGATATTAGATTCTTCGCTATGTTTCATGCAGTAGACTTTGTTAAAAATCACTT
AAAAAACAGAAACATCTATGCTGAGATAACTGGAAAAAACTTGGAGTCAGGCAGATTAGAAACCCTTACCGGAAGGGTTG
TAGGATACACACTCTCTCTCAGGGAAGCCGTTAACAATATCCATCTCGAAACTGAAAACGGGGTTGTAAAGGTTGGAGGC
ATGTTTGCGGTTATTGAAGATTATGAAAGTACTGAAATAAAATTCATTATGGGGTGA

Upstream 100 bases:

>100_bases
GGATTAAAGAGAATTTCATAATAACAAAGCATCTTGAGAGGTATCTTGATTTACTAAATTCTTTTTAAACCTCCTTCCAA
TATATTTTTAGGTGACAGTA

Downstream 100 bases:

>100_bases
TTTTTATGGCTGGTGTTAGGCTTGTAGATGTTTGGAAGGTGTTTGGGGAGGTTACTGCTGTTAGGGAGTTGAGTTTGGAG
GTTAAGGATGGGGAGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulator; Sugar-Specific Transcriptional Regulator TrmB; Maltose-Specific Transcriptional Repressor TrmB; Transcription Regulator Helix-Turn-Helix Family; Sugar-Specific Transcriptional Regulator TrmB Family; TrmB Family Transcriptional Regulator; Transcription Regulator TrmB-Like Protein

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MEIPPEISHALSEIGFTKYEILTYWTLLVYGPSTAKEISTKSGIPYNRVYDTISSLKLRGFVTEIEGTPKVYAAYSPRIA
FFRFKKELEDIMKKLEIELNNVKKEEQRPAIWRSRSFDEAIEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVT
VSLYIDKIPDLSEFKGKGNFFVRQFYKLNHLIGMTDGKEVVTIQNATFDSIGPPSFKSTYPEIIFSQYSLIIEIFKESTL
EKEIIGNPKDIRFFAMFHAVDFVKNHLKNRNIYAEITGKNLESGRLETLTGRVVGYTLSLREAVNNIHLETENGVVKVGG
MFAVIEDYESTEIKFIMG

Sequences:

>Translated_338_residues
MEIPPEISHALSEIGFTKYEILTYWTLLVYGPSTAKEISTKSGIPYNRVYDTISSLKLRGFVTEIEGTPKVYAAYSPRIA
FFRFKKELEDIMKKLEIELNNVKKEEQRPAIWRSRSFDEAIEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVT
VSLYIDKIPDLSEFKGKGNFFVRQFYKLNHLIGMTDGKEVVTIQNATFDSIGPPSFKSTYPEIIFSQYSLIIEIFKESTL
EKEIIGNPKDIRFFAMFHAVDFVKNHLKNRNIYAEITGKNLESGRLETLTGRVVGYTLSLREAVNNIHLETENGVVKVGG
MFAVIEDYESTEIKFIMG
>Mature_338_residues
MEIPPEISHALSEIGFTKYEILTYWTLLVYGPSTAKEISTKSGIPYNRVYDTISSLKLRGFVTEIEGTPKVYAAYSPRIA
FFRFKKELEDIMKKLEIELNNVKKEEQRPAIWRSRSFDEAIEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVT
VSLYIDKIPDLSEFKGKGNFFVRQFYKLNHLIGMTDGKEVVTIQNATFDSIGPPSFKSTYPEIIFSQYSLIIEIFKESTL
EKEIIGNPKDIRFFAMFHAVDFVKNHLKNRNIYAEITGKNLESGRLETLTGRVVGYTLSLREAVNNIHLETENGVVKVGG
MFAVIEDYESTEIKFIMG

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38839; Mature: 38839

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPPEISHALSEIGFTKYEILTYWTLLVYGPSTAKEISTKSGIPYNRVYDTISSLKLRG
CCCCHHHHHHHHHCCCCHHHHHHHHHHEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHE
FVTEIEGTPKVYAAYSPRIAFFRFKKELEDIMKKLEIELNNVKKEEQRPAIWRSRSFDEA
EEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCCCHHHH
IEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVTVSLYIDKIPDLSEFKGKGNF
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCH
FVRQFYKLNHLIGMTDGKEVVTIQNATFDSIGPPSFKSTYPEIIFSQYSLIIEIFKESTL
HHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKEIIGNPKDIRFFAMFHAVDFVKNHLKNRNIYAEITGKNLESGRLETLTGRVVGYTLSL
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCEEEEEEHH
REAVNNIHLETENGVVKVGGMFAVIEDYESTEIKFIMG
HHHHHHEEEECCCCEEEECCEEEEEECCCCCEEEEEEC
>Mature Secondary Structure
MEIPPEISHALSEIGFTKYEILTYWTLLVYGPSTAKEISTKSGIPYNRVYDTISSLKLRG
CCCCHHHHHHHHHCCCCHHHHHHHHHHEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHE
FVTEIEGTPKVYAAYSPRIAFFRFKKELEDIMKKLEIELNNVKKEEQRPAIWRSRSFDEA
EEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCCCHHHH
IEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVTVSLYIDKIPDLSEFKGKGNF
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCH
FVRQFYKLNHLIGMTDGKEVVTIQNATFDSIGPPSFKSTYPEIIFSQYSLIIEIFKESTL
HHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKEIIGNPKDIRFFAMFHAVDFVKNHLKNRNIYAEITGKNLESGRLETLTGRVVGYTLSL
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCEEEEEEHH
REAVNNIHLETENGVVKVGGMFAVIEDYESTEIKFIMG
HHHHHHEEEECCCCEEEECCEEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA