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The map label for this gene is ycjO [C]

Identifier: 18978112

GI number: 18978112

Start: 1616069

End: 1616962

Strand: Direct

Name: ycjO [C]

Synonym: PF1740

Alternate gene names: 18978112

Gene position: 1616069-1616962 (Clockwise)

Preceding gene: 18978111

Following gene: 18978113

Centisome position: 84.69

GC content: 37.47

Gene sequence:

>894_bases
ATGGATAATAACCTCACTTCCAAACTCAAGTATAGGGAAGCAAAACTTGGTTATTTAATGATACTCCCTCTTCTGACAGT
AGTTTTAGTGTTCATAATCTTACCTGTTATGGGAACCTTTTGGATTAGCCTTCATAGGGATGTGACCTTTATTCCTGAAA
AACCGTTTGTTGGACTGAGAAATTATTTACGCGTGTTATCTGCTCGAGAATTCTGGTATTCTACTTTTGTTACAGTATCT
TTCTCGTTTGTTAGTGTTTCTCTAGAAACAATATTGGGATTAAGTTTTGCGCTAATATTGAATGAAAGACTCAAAGGGAG
AGGGGTATTAAGAGCTATAGTTTTGATTCCCTGGGCAGTTCCAACAATCATCTCCGCGAGAACTTGGGAACTCATGTATA
ATTATAGCTATGGTCTTTTTAATTGGATATTGTCTATTCTTGGAGTAAGTCCAGTAAATTGGCTTGGGACTCCAATAAGT
GCTTTTTTTGCTATCGTAATTGCTGATGTTTGGAAAACAACACCTTTTATGACTCTTTTACTGTTGGCAGGTTTGCAAGC
CATTCCACAAGACTTGTATGAAGCAGCCTTGATAGATGGTGCGAGCATGTTCGAGAGGTTTAAGAGTATTACTTTGCCTT
TATTAAAACCGGTTTTGATTGTAGCACTTATATTGAGAACTATTGATGCATTGAGGGTGTTTGATATAATCTATGTACTT
ACTGGTGGAGGCCCAGGAGGTGCTACCACGTCAATTTCTCTCTTAGCTTTCAACTATTACAATCTTGGAGACTACGGAAT
TGGCTCTGCAATCTCGATTTTAACCTTTGTTCTAGTATTGTCGTTTACAATAGTGTACTTAAAAGTAGGAAGATTCAGGG
AGGGATTGAAATGA

Upstream 100 bases:

>100_bases
AAGAAGCATTGGACAAGGCTCAAAAAGAGGCAGAGGAATTAGTTAAACAATACAGCTGATTTTTGTTTTTTACTTCTTAA
CACAAATGGAGGGGAAGATA

Downstream 100 bases:

>100_bases
GAGAGGAAGTTCTAAAAAGAATATTACTAATTATCGGGGCCATATTAATGGCAATAATCTGTCTGTTTCCGTTTATATGG
ATGATTGTTGTTTCCTTTGC

Product: trehalose/maltose transport inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MDNNLTSKLKYREAKLGYLMILPLLTVVLVFIILPVMGTFWISLHRDVTFIPEKPFVGLRNYLRVLSAREFWYSTFVTVS
FSFVSVSLETILGLSFALILNERLKGRGVLRAIVLIPWAVPTIISARTWELMYNYSYGLFNWILSILGVSPVNWLGTPIS
AFFAIVIADVWKTTPFMTLLLLAGLQAIPQDLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVL
TGGGPGGATTSISLLAFNYYNLGDYGIGSAISILTFVLVLSFTIVYLKVGRFREGLK

Sequences:

>Translated_297_residues
MDNNLTSKLKYREAKLGYLMILPLLTVVLVFIILPVMGTFWISLHRDVTFIPEKPFVGLRNYLRVLSAREFWYSTFVTVS
FSFVSVSLETILGLSFALILNERLKGRGVLRAIVLIPWAVPTIISARTWELMYNYSYGLFNWILSILGVSPVNWLGTPIS
AFFAIVIADVWKTTPFMTLLLLAGLQAIPQDLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVL
TGGGPGGATTSISLLAFNYYNLGDYGIGSAISILTFVLVLSFTIVYLKVGRFREGLK
>Mature_297_residues
MDNNLTSKLKYREAKLGYLMILPLLTVVLVFIILPVMGTFWISLHRDVTFIPEKPFVGLRNYLRVLSAREFWYSTFVTVS
FSFVSVSLETILGLSFALILNERLKGRGVLRAIVLIPWAVPTIISARTWELMYNYSYGLFNWILSILGVSPVNWLGTPIS
AFFAIVIADVWKTTPFMTLLLLAGLQAIPQDLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVL
TGGGPGGATTSISLLAFNYYNLGDYGIGSAISILTFVLVLSFTIVYLKVGRFREGLK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=237, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=35.2941176470588, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=33.448275862069, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33211; Mature: 33211

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNLTSKLKYREAKLGYLMILPLLTVVLVFIILPVMGTFWISLHRDVTFIPEKPFVGLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
NYLRVLSAREFWYSTFVTVSFSFVSVSLETILGLSFALILNERLKGRGVLRAIVLIPWAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PTIISARTWELMYNYSYGLFNWILSILGVSPVNWLGTPISAFFAIVIADVWKTTPFMTLL
HHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCHHHHHH
LLAGLQAIPQDLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TGGGPGGATTSISLLAFNYYNLGDYGIGSAISILTFVLVLSFTIVYLKVGRFREGLK
ECCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDNNLTSKLKYREAKLGYLMILPLLTVVLVFIILPVMGTFWISLHRDVTFIPEKPFVGLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
NYLRVLSAREFWYSTFVTVSFSFVSVSLETILGLSFALILNERLKGRGVLRAIVLIPWAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PTIISARTWELMYNYSYGLFNWILSILGVSPVNWLGTPISAFFAIVIADVWKTTPFMTLL
HHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCHHHHHH
LLAGLQAIPQDLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TGGGPGGATTSISLLAFNYYNLGDYGIGSAISILTFVLVLSFTIVYLKVGRFREGLK
ECCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]