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The map label for this gene is 18978088

Identifier: 18978088

GI number: 18978088

Start: 1595798

End: 1596214

Strand: Reverse

Name: 18978088

Synonym: PF1716

Alternate gene names: NA

Gene position: 1596214-1595798 (Counterclockwise)

Preceding gene: 18978089

Following gene: 18978087

Centisome position: 83.65

GC content: 36.93

Gene sequence:

>417_bases
ATGAAGAGAGTTTGGCTGGTTATTCCTGATACAAATTTTCTTTTTATCCCTGGGCAATTTGGCGTGGACATAATATCTGA
GCTCGAAAGAATACTTGATGTGAATTACAAAATTGTAATACCGAACATAGTTTTGGAAGAATTGAAGACTATTCTCAGAG
AAGGCAAGCTTAGAGGAAAAGACCTTATTGCTGCTCGAATGGCACTTAAGTTGGCTGAACGGTTTCCCACAATTTACGTA
GGAGATTTTATGTCCAAAACTACAGATGAGTTAATTTATGAGTTTGCGATTTCAAACGACAATGTGATAGTTTGCACTAA
TGATAAGCAATTGAGAAAAAGGTTAAGGGAAGCAGGGGTTCCAGTTGTGTTTCTAAGACAAAAGAAAAAGCTAGAACTTG
AGGGTATGTTGGGATAA

Upstream 100 bases:

>100_bases
TACCAGTTTGTGCTGAACCTGGAGAAAGAGTTGCAATTAGCAGGCAAATAGGGTCAAGATGGAGATTGATAGGATACGGC
ATAATTAAGGAGTAAAGGCA

Downstream 100 bases:

>100_bases
ATGACGAAGTATTCTCAAGAAGAGTTATAAACATTCTACATTATTTCCAAAGTTTAGGTGAAATAAATGAAGGTTGCTGT
AATTGGAGCGGGAACAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKRVWLVIPDTNFLFIPGQFGVDIISELERILDVNYKIVIPNIVLEELKTILREGKLRGKDLIAARMALKLAERFPTIYV
GDFMSKTTDELIYEFAISNDNVIVCTNDKQLRKRLREAGVPVVFLRQKKKLELEGMLG

Sequences:

>Translated_138_residues
MKRVWLVIPDTNFLFIPGQFGVDIISELERILDVNYKIVIPNIVLEELKTILREGKLRGKDLIAARMALKLAERFPTIYV
GDFMSKTTDELIYEFAISNDNVIVCTNDKQLRKRLREAGVPVVFLRQKKKLELEGMLG
>Mature_138_residues
MKRVWLVIPDTNFLFIPGQFGVDIISELERILDVNYKIVIPNIVLEELKTILREGKLRGKDLIAARMALKLAERFPTIYV
GDFMSKTTDELIYEFAISNDNVIVCTNDKQLRKRLREAGVPVVFLRQKKKLELEGMLG

Specific function: Unknown

COG id: COG1412

COG function: function code R; Uncharacterized proteins of PilT N-term./Vapc superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PIN domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006984
- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15909; Mature: 15909

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVWLVIPDTNFLFIPGQFGVDIISELERILDVNYKIVIPNIVLEELKTILREGKLRGK
CCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCH
DLIAARMALKLAERFPTIYVGDFMSKTTDELIYEFAISNDNVIVCTNDKQLRKRLREAGV
HHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHCCC
PVVFLRQKKKLELEGMLG
CEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKRVWLVIPDTNFLFIPGQFGVDIISELERILDVNYKIVIPNIVLEELKTILREGKLRGK
CCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCH
DLIAARMALKLAERFPTIYVGDFMSKTTDELIYEFAISNDNVIVCTNDKQLRKRLREAGV
HHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHCCC
PVVFLRQKKKLELEGMLG
CEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]