Click here to switch to the map view.

The map label for this gene is aspC [H]

Identifier: 18978074

GI number: 18978074

Start: 1581932

End: 1582969

Strand: Direct

Name: aspC [H]

Synonym: PF1702

Alternate gene names: 18978074

Gene position: 1581932-1582969 (Clockwise)

Preceding gene: 18978073

Following gene: 18978075

Centisome position: 82.9

GC content: 39.11

Gene sequence:

>1038_bases
ATGTTCAACGTTTATGAGCTATTTAATAAGATAAATGAGGTAAAACCAGAGATTCGACTTGATGCAGGACAACCAGATAT
CCCCGTAGCTAACGAAATAATAGAAGAAGCCATAAATTCTCTAAAAAGGGGAGAAACTGGCTATGTAAGTACAACTGGAA
TTAACGAGTTGAGAGAAAAGATAGCAGAAGTAGAAGGAGTGAGCAAAGAAGAGGTAATTGTTGGGCCTGGAGCCAAAATA
TTGATAGCTGCAGAGATAGCAATGGCCAACAAGATTGGAGTAATTGCCCCCTACTGGAATGCCTACCTATTGATAGCCAA
GAACTTTGAAAAAGAAGTTAAAATAATTGAGACAACATTAGAAAACTCCTGGGAGCCTGAAATTAACGACAACTTAGATG
TTGACCTCCTAATTCTCAACTACCCCAATAACCCTACTGGAAAAATACTCCCAAGAGAAAAACTCAAAGAACTCGTAGAA
GTTGCAGAAGAGAAAGGAATCAAAATTCTTTCCGATGAAATCTATGCTGAAATTTCTTTTAAGTCATTTACTCCTGTTCG
AGAGCTCTATGAAAACACGGTCACCGTAAAGGGGTTCTCCAAACTGTATTCAATGACTGGCTTTAGGCTTGGATACGCTA
TTGCCGATAAGGAAGAGATAAGGAAAATAAAAACATTCATTGAATCAACTGTCACCTGTGTTCCTCCTTTCGTTCAAAGG
GCTGGGATCAAGGCTTTGGAGCTTAGAGATGAGTTAATGAAAAAAGTGAGTAGGGAGTATAAGAGAAGAGCAGAACTTGC
CTCCAAAATCTTGAGGGGATTAGAGTTCTATGAACCCGATGGAGCATTCTACATATTCCTCAAAACACCCATTGATGGGT
TGGAATTTGTCTATAAACTACTCGAGAGGGGAGTTTCAGCATTCCCAGGAATAGCGTTTGGAAATTATCAAAACTTCATA
AGGATCTCACTAACGAGTGATAAGCTCGAGAAGGGATTAAACATAATCAAGGAGGTAGCAGAATGCGAATCACAATAA

Upstream 100 bases:

>100_bases
CTCAATCTCCCCATAGAAGATAGAAAAAGAGAAGAAGAAGTTCTAAGAAGAGCTGGCGAGTTTAGGGAAATTTTTGAAAA
GATTTTGGAGGTTAGCAAAG

Downstream 100 bases:

>100_bases
GTGGATATGGTAAAATGGGAAAACTCTTTGGAAGAGTTCTTTCTGAGGAATTAAACTCAGAAGTGAAATTTTACTCTAGC
CATACAATACTAGATTTTTC

Product: aspartate aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MFNVYELFNKINEVKPEIRLDAGQPDIPVANEIIEEAINSLKRGETGYVSTTGINELREKIAEVEGVSKEEVIVGPGAKI
LIAAEIAMANKIGVIAPYWNAYLLIAKNFEKEVKIIETTLENSWEPEINDNLDVDLLILNYPNNPTGKILPREKLKELVE
VAEEKGIKILSDEIYAEISFKSFTPVRELYENTVTVKGFSKLYSMTGFRLGYAIADKEEIRKIKTFIESTVTCVPPFVQR
AGIKALELRDELMKKVSREYKRRAELASKILRGLEFYEPDGAFYIFLKTPIDGLEFVYKLLERGVSAFPGIAFGNYQNFI
RISLTSDKLEKGLNIIKEVAECESQ

Sequences:

>Translated_345_residues
MFNVYELFNKINEVKPEIRLDAGQPDIPVANEIIEEAINSLKRGETGYVSTTGINELREKIAEVEGVSKEEVIVGPGAKI
LIAAEIAMANKIGVIAPYWNAYLLIAKNFEKEVKIIETTLENSWEPEINDNLDVDLLILNYPNNPTGKILPREKLKELVE
VAEEKGIKILSDEIYAEISFKSFTPVRELYENTVTVKGFSKLYSMTGFRLGYAIADKEEIRKIKTFIESTVTCVPPFVQR
AGIKALELRDELMKKVSREYKRRAELASKILRGLEFYEPDGAFYIFLKTPIDGLEFVYKLLERGVSAFPGIAFGNYQNFI
RISLTSDKLEKGLNIIKEVAECESQ
>Mature_345_residues
MFNVYELFNKINEVKPEIRLDAGQPDIPVANEIIEEAINSLKRGETGYVSTTGINELREKIAEVEGVSKEEVIVGPGAKI
LIAAEIAMANKIGVIAPYWNAYLLIAKNFEKEVKIIETTLENSWEPEINDNLDVDLLILNYPNNPTGKILPREKLKELVE
VAEEKGIKILSDEIYAEISFKSFTPVRELYENTVTVKGFSKLYSMTGFRLGYAIADKEEIRKIKTFIESTVTCVPPFVQR
AGIKALELRDELMKKVSREYKRRAELASKILRGLEFYEPDGAFYIFLKTPIDGLEFVYKLLERGVSAFPGIAFGNYQNFI
RISLTSDKLEKGLNIIKEVAECESQ

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=357, Percent_Identity=26.3305322128852, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI56713256, Length=383, Percent_Identity=22.7154046997389, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI56713254, Length=383, Percent_Identity=22.7154046997389, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI1788722, Length=358, Percent_Identity=27.0949720670391, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786816, Length=338, Percent_Identity=23.6686390532544, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788627, Length=320, Percent_Identity=27.1875, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71994476, Length=124, Percent_Identity=30.6451612903226, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71994472, Length=124, Percent_Identity=30.6451612903226, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17567369, Length=185, Percent_Identity=24.3243243243243, Blast_Score=71, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322401, Length=161, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI18859735, Length=365, Percent_Identity=25.2054794520548, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28573069, Length=178, Percent_Identity=24.1573033707865, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24646114, Length=178, Percent_Identity=24.1573033707865, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28573067, Length=178, Percent_Identity=24.1573033707865, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28573065, Length=178, Percent_Identity=24.1573033707865, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 39064; Mature: 39064

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNVYELFNKINEVKPEIRLDAGQPDIPVANEIIEEAINSLKRGETGYVSTTGINELREK
CCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH
IAEVEGVSKEEVIVGPGAKILIAAEIAMANKIGVIAPYWNAYLLIAKNFEKEVKIIETTL
HHHHCCCCCCCEEECCCCEEEEEEHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
ENSWEPEINDNLDVDLLILNYPNNPTGKILPREKLKELVEVAEEKGIKILSDEIYAEISF
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHEEECC
KSFTPVRELYENTVTVKGFSKLYSMTGFRLGYAIADKEEIRKIKTFIESTVTCVPPFVQR
CCCCHHHHHHHCCEEEHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHHHHCCHHHHH
AGIKALELRDELMKKVSREYKRRAELASKILRGLEFYEPDGAFYIFLKTPIDGLEFVYKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCHHHHHHHH
LERGVSAFPGIAFGNYQNFIRISLTSDKLEKGLNIIKEVAECESQ
HHCCHHHCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNVYELFNKINEVKPEIRLDAGQPDIPVANEIIEEAINSLKRGETGYVSTTGINELREK
CCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH
IAEVEGVSKEEVIVGPGAKILIAAEIAMANKIGVIAPYWNAYLLIAKNFEKEVKIIETTL
HHHHCCCCCCCEEECCCCEEEEEEHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
ENSWEPEINDNLDVDLLILNYPNNPTGKILPREKLKELVEVAEEKGIKILSDEIYAEISF
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHEEECC
KSFTPVRELYENTVTVKGFSKLYSMTGFRLGYAIADKEEIRKIKTFIESTVTCVPPFVQR
CCCCHHHHHHHCCEEEHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHHHHCCHHHHH
AGIKALELRDELMKKVSREYKRRAELASKILRGLEFYEPDGAFYIFLKTPIDGLEFVYKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCHHHHHHHH
LERGVSAFPGIAFGNYQNFIRISLTSDKLEKGLNIIKEVAECESQ
HHCCHHHCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA