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The map label for this gene is bioY [H]

Identifier: 18978049

GI number: 18978049

Start: 1560039

End: 1560554

Strand: Direct

Name: bioY [H]

Synonym: PF1677

Alternate gene names: 18978049

Gene position: 1560039-1560554 (Clockwise)

Preceding gene: 18978047

Following gene: 161484707

Centisome position: 81.75

GC content: 43.02

Gene sequence:

>516_bases
ATGAGAGCTAGGGATATTGCATTATCAGGAGTATTTGCGGCATTAACAGCAGTTGGCGCCCAGATTTCTGTGCCTCTCGG
CCCAGTACCGTTTACATTTCAAGTCCTCATGGTATTCCTCTCCGGATTAGTTTTAGGAGCGAAGCTTGGAGCTCTTAGTC
AAGCTATCTACCTATTGCTAGGAGCGCTTGGATTACCAGTCTTTGCCAGGTTTAGTGGAGGAATAATCCACATCTATGGA
CCGACTGGAGGGTATCTACTTGCCTTTCCGATAGCAGCCTTTATTTCAGGCTATTTCTCAGAAAAAGCTAAGACCTTCTG
GGGAAAACTGGGAGGGTGTCTTTTAGGATTAAGCGTAATTTATATTCTCGGATGGGCAAGATTGGGAATGTGGCTTGGTA
TGGACTTTAAGAAAGCATTTTATCTAGGAGTGGCACCTTTCATTGTTTTCGATATTATAAAGGCTCTAATGGCACTTGTA
ATTTCTGACAAAATAAAGAAGGCTCTTAGAGGATGA

Upstream 100 bases:

>100_bases
AACATCTTCAATGATATTCCCAAAATGCTTCAAAAATTTCATCCTTGTGGTTAACCAAAATATATTTAAAGGTTAACGAA
ATTGTAACGTGGGTGGTCAT

Downstream 100 bases:

>100_bases
CTCTTCTTTACATTTTTAAACCTTAATCTTGAACAAAGTAAACTAAACTATAGATGCACAAAAATTTTTTCGAATAAATT
GACATTTAACCTAAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRARDIALSGVFAALTAVGAQISVPLGPVPFTFQVLMVFLSGLVLGAKLGALSQAIYLLLGALGLPVFARFSGGIIHIYG
PTGGYLLAFPIAAFISGYFSEKAKTFWGKLGGCLLGLSVIYILGWARLGMWLGMDFKKAFYLGVAPFIVFDIIKALMALV
ISDKIKKALRG

Sequences:

>Translated_171_residues
MRARDIALSGVFAALTAVGAQISVPLGPVPFTFQVLMVFLSGLVLGAKLGALSQAIYLLLGALGLPVFARFSGGIIHIYG
PTGGYLLAFPIAAFISGYFSEKAKTFWGKLGGCLLGLSVIYILGWARLGMWLGMDFKKAFYLGVAPFIVFDIIKALMALV
ISDKIKKALRG
>Mature_171_residues
MRARDIALSGVFAALTAVGAQISVPLGPVPFTFQVLMVFLSGLVLGAKLGALSQAIYLLLGALGLPVFARFSGGIIHIYG
PTGGYLLAFPIAAFISGYFSEKAKTFWGKLGGCLLGLSVIYILGWARLGMWLGMDFKKAFYLGVAPFIVFDIIKALMALV
ISDKIKKALRG

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18164; Mature: 18164

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARDIALSGVFAALTAVGAQISVPLGPVPFTFQVLMVFLSGLVLGAKLGALSQAIYLLL
CCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALGLPVFARFSGGIIHIYGPTGGYLLAFPIAAFISGYFSEKAKTFWGKLGGCLLGLSVI
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILGWARLGMWLGMDFKKAFYLGVAPFIVFDIIKALMALVISDKIKKALRG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRARDIALSGVFAALTAVGAQISVPLGPVPFTFQVLMVFLSGLVLGAKLGALSQAIYLLL
CCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALGLPVFARFSGGIIHIYGPTGGYLLAFPIAAFISGYFSEKAKTFWGKLGGCLLGLSVI
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILGWARLGMWLGMDFKKAFYLGVAPFIVFDIIKALMALVISDKIKKALRG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]