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The map label for this gene is ygeA [H]

Identifier: 18978047

GI number: 18978047

Start: 1558540

End: 1559235

Strand: Direct

Name: ygeA [H]

Synonym: PF1675

Alternate gene names: 18978047

Gene position: 1558540-1559235 (Clockwise)

Preceding gene: 18978044

Following gene: 18978049

Centisome position: 81.67

GC content: 38.22

Gene sequence:

>696_bases
GTGAGAGTAGTGAAGAAAATAGGACTAATTGGAGGAATGACTCCCGAATCTACGTGCTATTACTACAGAAAATACATTGA
AATAAGCAGAAAGAAATTCAGAAAATATGAGTATCCCGAGCTTCTTATTTACTCCATAAACTTTCGGGACTTCTTTATGA
ATCCAGAGGGATGGGAAGGAAGAAAAAGAATCCTAATAAACGCTGCTAAAGCTTTGGAGAGGGCTGGAGCTGAATTAATT
GCTCTTACAGCAAACACTCCCCATATAGTTTTTGATGATATCCAAAAAGAGATAAGCGTTCCAATGGTCAGCATAATTGA
TGCCGTTGCAGAAGAAATTCTAAGCCATGGCCTAAAGAAAGTTCTATTGCTGGAGACTAAAACGACTATGAGCTCCGGCT
TTTATGTAAATGCACTTAAAAATAAGGGCCTAGAAGTTGTTGTTCCAAACGAAGAAGAGCAAGAGGAACTCAATAGGATA
ATTTTCGAGGAGCTTGCATTTGAGAATTTGAAGAGCAAGAGATGGATAATAGATTTAATAGAAAGGTATGCAAAAGAAGA
AGGGGTTGAGGGAGTAATTCTTGGATGTACTGAACTACCTCTGGCTGTCAAGCGGGGTGACGTGAGTATAGAAGTCTTTG
ATTCAGCGGAAATCCATATCAAAAAATTAATTGAAGTTGCCTCTCAAAGCATTTAA

Upstream 100 bases:

>100_bases
AGAAAACGCCACATAATCGTCAACAAAGCGAACCTCCATTATATCACCTGAGAGTTTTTTCACAAAAACGTTCTTAAGCA
TTTAGATTCCCCCTATTTCG

Downstream 100 bases:

>100_bases
CATGTTTGATAAGAGGTCCTTAGAGAACTTTAGTAAATCTACTTCCCTCCCAAGTTCTTTTTTCAGTGATGTTGCTAATG
GGTAAGTAACATCATTATTA

Product: putative aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRVVKKIGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIYSINFRDFFMNPEGWEGRKRILINAAKALERAGAELI
ALTANTPHIVFDDIQKEISVPMVSIIDAVAEEILSHGLKKVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRI
IFEELAFENLKSKRWIIDLIERYAKEEGVEGVILGCTELPLAVKRGDVSIEVFDSAEIHIKKLIEVASQSI

Sequences:

>Translated_231_residues
MRVVKKIGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIYSINFRDFFMNPEGWEGRKRILINAAKALERAGAELI
ALTANTPHIVFDDIQKEISVPMVSIIDAVAEEILSHGLKKVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRI
IFEELAFENLKSKRWIIDLIERYAKEEGVEGVILGCTELPLAVKRGDVSIEVFDSAEIHIKKLIEVASQSI
>Mature_231_residues
MRVVKKIGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIYSINFRDFFMNPEGWEGRKRILINAAKALERAGAELI
ALTANTPHIVFDDIQKEISVPMVSIIDAVAEEILSHGLKKVLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRI
IFEELAFENLKSKRWIIDLIERYAKEEGVEGVILGCTELPLAVKRGDVSIEVFDSAEIHIKKLIEVASQSI

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=226, Percent_Identity=35.8407079646018, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 26402; Mature: 26402

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVKKIGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIYSINFRDFFMNPEGWEG
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHEEECCCCCCCC
RKRILINAAKALERAGAELIALTANTPHIVFDDIQKEISVPMVSIIDAVAEEILSHGLKK
HHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRIIFEELAFENLKSKRWIIDLI
EEEEEECHHCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ERYAKEEGVEGVILGCTELPLAVKRGDVSIEVFDSAEIHIKKLIEVASQSI
HHHHHHCCCCEEEEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVVKKIGLIGGMTPESTCYYYRKYIEISRKKFRKYEYPELLIYSINFRDFFMNPEGWEG
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHEEECCCCCCCC
RKRILINAAKALERAGAELIALTANTPHIVFDDIQKEISVPMVSIIDAVAEEILSHGLKK
HHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VLLLETKTTMSSGFYVNALKNKGLEVVVPNEEEQEELNRIIFEELAFENLKSKRWIIDLI
EEEEEECHHCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ERYAKEEGVEGVILGCTELPLAVKRGDVSIEVFDSAEIHIKKLIEVASQSI
HHHHHHCCCCEEEEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]