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The map label for this gene is pdaD [H]

Identifier: 18977995

GI number: 18977995

Start: 1514933

End: 1515409

Strand: Reverse

Name: pdaD [H]

Synonym: PF1623

Alternate gene names: 18977995

Gene position: 1515409-1514933 (Counterclockwise)

Preceding gene: 18977998

Following gene: 18977993

Centisome position: 79.41

GC content: 44.44

Gene sequence:

>477_bases
ATGAGCTGGATAACTCCTAAAAAGGCCATAATGCTTGCAGCGGCAGCTGAAGGCGGGACAAAGCTTAATGCTTTCGATAA
TGCTCTATTAAAGATGGGAATTGGAAATGTGAACCTAGTAAAGCTCAGCAGTGTTATACCGGCTCATATAGAGTGGCTGG
ATGAGTTGCCAAAGAACATTCCTATAGGGATGTTGTTACCAACAGTCTACACCCACATAGAGAGCGATGAGCCAGGTTCA
ACGATAAGCGCAGCTTTAGGTATTGGGCTTAGCGAAGGCAATGAAGGTGGGCTAATCTATGAATATTCAGGATACTGCAA
GAAGGAAGAGGCTGAGGAAATGGTTAAGAAGATGGTTGAGGAAGGTTTTAGGGTTAGAGGATGGAAACTCAAGGAAATAA
AGATAGTCTCCGCTGAAATAACGGTTAAGGACAAGCCAGCGGCTGCAGTTGCTGCAGTAGTTATGTTCCCATACTAG

Upstream 100 bases:

>100_bases
TCCTACAAAACACCGCAGATTAAACTTCTCCTACTTACGAAAACTTTAAAAGATAATAAATTTGGTATCCGTTTAGCGAG
AGAATATAGGAGGGAGAAGA

Downstream 100 bases:

>100_bases
CAAGAGCTTTTCTTACCTCTTCTATTACCTCATCATTGCAATCCCAACACATAACCTCAAAGCTGGGAACTCTTACACTA
ATCCTCACTTTTCTCTTTCT

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSWITPKKAIMLAAAAEGGTKLNAFDNALLKMGIGNVNLVKLSSVIPAHIEWLDELPKNIPIGMLLPTVYTHIESDEPGS
TISAALGIGLSEGNEGGLIYEYSGYCKKEEAEEMVKKMVEEGFRVRGWKLKEIKIVSAEITVKDKPAAAVAAVVMFPY

Sequences:

>Translated_158_residues
MSWITPKKAIMLAAAAEGGTKLNAFDNALLKMGIGNVNLVKLSSVIPAHIEWLDELPKNIPIGMLLPTVYTHIESDEPGS
TISAALGIGLSEGNEGGLIYEYSGYCKKEEAEEMVKKMVEEGFRVRGWKLKEIKIVSAEITVKDKPAAAVAAVVMFPY
>Mature_157_residues
SWITPKKAIMLAAAAEGGTKLNAFDNALLKMGIGNVNLVKLSSVIPAHIEWLDELPKNIPIGMLLPTVYTHIESDEPGST
ISAALGIGLSEGNEGGLIYEYSGYCKKEEAEEMVKKMVEEGFRVRGWKLKEIKIVSAEITVKDKPAAAVAAVVMFPY

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 17108; Mature: 16977

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWITPKKAIMLAAAAEGGTKLNAFDNALLKMGIGNVNLVKLSSVIPAHIEWLDELPKNI
CCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCC
PIGMLLPTVYTHIESDEPGSTISAALGIGLSEGNEGGLIYEYSGYCKKEEAEEMVKKMVE
CCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
EGFRVRGWKLKEIKIVSAEITVKDKPAAAVAAVVMFPY
CCCEECCEEEEEEEEEEEEEEECCCCHHHEEEEEECCC
>Mature Secondary Structure 
SWITPKKAIMLAAAAEGGTKLNAFDNALLKMGIGNVNLVKLSSVIPAHIEWLDELPKNI
CCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCC
PIGMLLPTVYTHIESDEPGSTISAALGIGLSEGNEGGLIYEYSGYCKKEEAEEMVKKMVE
CCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
EGFRVRGWKLKEIKIVSAEITVKDKPAAAVAAVVMFPY
CCCEECCEEEEEEEEEEEEEEECCCCHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]