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The map label for this gene is 18977924

Identifier: 18977924

GI number: 18977924

Start: 1449703

End: 1450131

Strand: Direct

Name: 18977924

Synonym: PF1552

Alternate gene names: NA

Gene position: 1449703-1450131 (Clockwise)

Preceding gene: 18977922

Following gene: 18977925

Centisome position: 75.97

GC content: 38.46

Gene sequence:

>429_bases
ATGAGACAGTGGGAACACTATGAACATACGGCTGATATAGGAATTAGGGGCTATGGAGACACACTTGAGGAGGCTTTCGA
AGCTGTGGCATTAGCTCTCTTTGATGTAATTGTAAATGTTAGAAAGATTGAGAAAAAAGTGGAAATAGATATTGAAGTAG
AGGGAGAGGATTTAGAAAGCTTGCTATATTCATTTTTAGAGGAACTATTATACCTCCACGACATAGAGGGACTTGTTTTT
GGAGACTTTAAAGTAAAAATAGAGCAGAAAGACGGAAAATATATATTAAGGGGAAAGGCCTACGGAGAAAAATTTGATCC
AGAGAAACACGAGCCAAAGGAAGAAGTCAAGGCAATAACATATCACGACATGAAAATAGAGAGACTACCAGATGGAAGAT
GGATGGCTCAGCTAGTTCCAGACATATGA

Upstream 100 bases:

>100_bases
CTGCTTTAGAATAGTGAGAATGAATGTGAAGATCTCCATCAACTATCATGGAGAGAAATCATTAAAGTCAGTTTATAATT
TTAACTTAGGGGGATGAAAA

Downstream 100 bases:

>100_bases
TGGAGGTGTAAAAGTGGAGTATTTAGAAGAATTCAGAAAAATAAACGAAAAATTAGTGGAGAGATACTCAAAACTTGACG
AAAGCGAAGACTTTTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRQWEHYEHTADIGIRGYGDTLEEAFEAVALALFDVIVNVRKIEKKVEIDIEVEGEDLESLLYSFLEELLYLHDIEGLVF
GDFKVKIEQKDGKYILRGKAYGEKFDPEKHEPKEEVKAITYHDMKIERLPDGRWMAQLVPDI

Sequences:

>Translated_142_residues
MRQWEHYEHTADIGIRGYGDTLEEAFEAVALALFDVIVNVRKIEKKVEIDIEVEGEDLESLLYSFLEELLYLHDIEGLVF
GDFKVKIEQKDGKYILRGKAYGEKFDPEKHEPKEEVKAITYHDMKIERLPDGRWMAQLVPDI
>Mature_142_residues
MRQWEHYEHTADIGIRGYGDTLEEAFEAVALALFDVIVNVRKIEKKVEIDIEVEGEDLESLLYSFLEELLYLHDIEGLVF
GDFKVKIEQKDGKYILRGKAYGEKFDPEKHEPKEEVKAITYHDMKIERLPDGRWMAQLVPDI

Specific function: Unknown

COG id: COG1371

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0211 (archease) family

Homologues:

Organism=Homo sapiens, GI30425510, Length=127, Percent_Identity=40.9448818897638, Blast_Score=94, Evalue=3e-20,
Organism=Homo sapiens, GI113414298, Length=70, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI169164528, Length=70, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI113413492, Length=70, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI310127943, Length=70, Percent_Identity=42.8571428571429, Blast_Score=64, Evalue=4e-11,
Organism=Homo sapiens, GI310114697, Length=70, Percent_Identity=42.8571428571429, Blast_Score=64, Evalue=4e-11,
Organism=Homo sapiens, GI310119460, Length=70, Percent_Identity=42.8571428571429, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17506009, Length=131, Percent_Identity=32.824427480916, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24648776, Length=125, Percent_Identity=39.2, Blast_Score=86, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1552_PYRFU (Q8U0N4)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579281.1
- ProteinModelPortal:   Q8U0N4
- SMR:   Q8U0N4
- EnsemblBacteria:   EBPYRT00000006017
- GeneID:   1469428
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1552
- NMPDR:   fig|186497.1.peg.1599
- GeneTree:   EBGT00050000023240
- HOGENOM:   HBG729173
- OMA:   YMTDTET
- ProtClustDB:   PRK00407
- HAMAP:   MF_01222
- InterPro:   IPR002804
- InterPro:   IPR022952
- Gene3D:   G3DSA:3.55.10.10
- PANTHER:   PTHR12682

Pfam domain/function: PF01951 DUF101; SSF69819 DUF101

EC number: NA

Molecular weight: Translated: 16628; Mature: 16628

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQWEHYEHTADIGIRGYGDTLEEAFEAVALALFDVIVNVRKIEKKVEIDIEVEGEDLES
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHH
LLYSFLEELLYLHDIEGLVFGDFKVKIEQKDGKYILRGKAYGEKFDPEKHEPKEEVKAIT
HHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
YHDMKIERLPDGRWMAQLVPDI
CCCEEEEECCCCCHHHHHCCCC
>Mature Secondary Structure
MRQWEHYEHTADIGIRGYGDTLEEAFEAVALALFDVIVNVRKIEKKVEIDIEVEGEDLES
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHH
LLYSFLEELLYLHDIEGLVFGDFKVKIEQKDGKYILRGKAYGEKFDPEKHEPKEEVKAIT
HHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
YHDMKIERLPDGRWMAQLVPDI
CCCEEEEECCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA