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The map label for this gene is 18977923

Identifier: 18977923

GI number: 18977923

Start: 1448377

End: 1449651

Strand: Reverse

Name: 18977923

Synonym: PF1551

Alternate gene names: NA

Gene position: 1449651-1448377 (Counterclockwise)

Preceding gene: 18977927

Following gene: 18977919

Centisome position: 75.97

GC content: 39.69

Gene sequence:

>1275_bases
ATGATAGTTGATGGAGATCTTCACATTCATTCTCACTATTCTAAAGCAGTTTCCAAGCTCATGACCTTCCCAATAATTGC
TGAAAATGCAAAACTTAAGGGTCTCAACTTAGTAGGGACGGGGGATAGTCTAAACCCTCACTGGGAAAAGGAGTTATTAA
AACACTCAAAGCCTATTGATGATGGTACTTTTGAAGTTAACGGGGTTAAGTTCATACTAACCTGTGAGGTTGAGGATAAA
AGAAGAGTTCACCATCTTCTTATATTCCCAACATTGTCCCAGGTGAGAGAGTTTAGGGAGAAAGTAAAGATATACTCCAC
AAATATTGAGAGTGAGGGTAGGCCTAACTTAAATTTAACAGCCGAAGAAATTGCTGAAATGGCAAATGAGTTAGATATTT
TAATAGGCCCCGCTCATGCCTTCACACCTTGGACAAGCTTGTATAAGGAATATGATTCGTTGAAAGATGCATATGGAGAT
GCGAAAATAGATTTTCTGGAGTTAGGACTTTCAGCGGATAGTGACATGGCTGACATGATAAAGGCTCACCATTCAATTCC
ATACTTGAGCAATTCCGATGCTCATTCCCCGAACCCCCATAGATTGGGAAGGGAGTTTAACAGATTTGAAGTTAAAGATG
TGACTTTTGAGGAAATTAGAAAAGCAATAAAGGGGGTAGGTGGGAGAAAGATCATGTTAAATGCTGGTTTAGATCCAAGG
CTTGGGAAATATCATTTAACTGCCTGCAGTAGGTGTTATACAAAATACACACTTCAAGATGCGGTTTCCCTCAGTTGGAA
GTGTCCCAAGTGTGGAGGAATTATCAAAAAGGGGGTAAGAGACAGAATTCTTGAGTTGGCAGATACGAGTGAAAAACCAA
AAGATAGGCCTCCATATGTTAGGTTAGCTCCTTTGGCTGAGATTATAGCTATGGTACTTGGGAAGGGAATTGAAAGTAAG
GCTGTTAAGCTTCTATGGAATAGATTCCTTAGGGAATTTGGAAGTGAAATAAGAGTGCTGATAGATTTGCCAATAGAATC
AATAGCTAGTGTTCATGAAGGAGTTGCGAAGGCGATATGGGCATATAGGAATAACAAACTCATTATAGTCCCAGGAGGGG
GAGGTAAGTACGGAGAGATAAGGATCCCAGAAGAAATTCTAAAGGCTAAAATTGAAGATTTGAATAGTATTGAGATATCG
GGAGGAGAAGCCGAGTTGCCGAAACCTAAGCAGAGGACCCTGCTTCAATATATTAAAAATAAAGAGGTAAATTAA

Upstream 100 bases:

>100_bases
CCCTAATTCCTATATCAGCCGTATGTTCATAGTGTTCCCACTGTCTCATTTTTCATCCCCCTAAGTTAAAATTATAAACT
GACTTTAATGATTTCTCTCC

Downstream 100 bases:

>100_bases
ATGCTCATTATCCCTAAGATTTCTCTGTTTTCTAGGTTTATAATCTTAATTTCTCTTTCCCTTGTGTTGAGAATTGCAAA
GCTTTTAATTCCTGTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MIVDGDLHIHSHYSKAVSKLMTFPIIAENAKLKGLNLVGTGDSLNPHWEKELLKHSKPIDDGTFEVNGVKFILTCEVEDK
RRVHHLLIFPTLSQVREFREKVKIYSTNIESEGRPNLNLTAEEIAEMANELDILIGPAHAFTPWTSLYKEYDSLKDAYGD
AKIDFLELGLSADSDMADMIKAHHSIPYLSNSDAHSPNPHRLGREFNRFEVKDVTFEEIRKAIKGVGGRKIMLNAGLDPR
LGKYHLTACSRCYTKYTLQDAVSLSWKCPKCGGIIKKGVRDRILELADTSEKPKDRPPYVRLAPLAEIIAMVLGKGIESK
AVKLLWNRFLREFGSEIRVLIDLPIESIASVHEGVAKAIWAYRNNKLIIVPGGGGKYGEIRIPEEILKAKIEDLNSIEIS
GGEAELPKPKQRTLLQYIKNKEVN

Sequences:

>Translated_424_residues
MIVDGDLHIHSHYSKAVSKLMTFPIIAENAKLKGLNLVGTGDSLNPHWEKELLKHSKPIDDGTFEVNGVKFILTCEVEDK
RRVHHLLIFPTLSQVREFREKVKIYSTNIESEGRPNLNLTAEEIAEMANELDILIGPAHAFTPWTSLYKEYDSLKDAYGD
AKIDFLELGLSADSDMADMIKAHHSIPYLSNSDAHSPNPHRLGREFNRFEVKDVTFEEIRKAIKGVGGRKIMLNAGLDPR
LGKYHLTACSRCYTKYTLQDAVSLSWKCPKCGGIIKKGVRDRILELADTSEKPKDRPPYVRLAPLAEIIAMVLGKGIESK
AVKLLWNRFLREFGSEIRVLIDLPIESIASVHEGVAKAIWAYRNNKLIIVPGGGGKYGEIRIPEEILKAKIEDLNSIEIS
GGEAELPKPKQRTLLQYIKNKEVN
>Mature_424_residues
MIVDGDLHIHSHYSKAVSKLMTFPIIAENAKLKGLNLVGTGDSLNPHWEKELLKHSKPIDDGTFEVNGVKFILTCEVEDK
RRVHHLLIFPTLSQVREFREKVKIYSTNIESEGRPNLNLTAEEIAEMANELDILIGPAHAFTPWTSLYKEYDSLKDAYGD
AKIDFLELGLSADSDMADMIKAHHSIPYLSNSDAHSPNPHRLGREFNRFEVKDVTFEEIRKAIKGVGGRKIMLNAGLDPR
LGKYHLTACSRCYTKYTLQDAVSLSWKCPKCGGIIKKGVRDRILELADTSEKPKDRPPYVRLAPLAEIIAMVLGKGIESK
AVKLLWNRFLREFGSEIRVLIDLPIESIASVHEGVAKAIWAYRNNKLIIVPGGGGKYGEIRIPEEILKAKIEDLNSIEIS
GGEAELPKPKQRTLLQYIKNKEVN

Specific function: Unknown

COG id: COG1379

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005287
- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47654; Mature: 47654

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00202 RUBREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDGDLHIHSHYSKAVSKLMTFPIIAENAKLKGLNLVGTGDSLNPHWEKELLKHSKPID
CEECCCEEEHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCC
DGTFEVNGVKFILTCEVEDKRRVHHLLIFPTLSQVREFREKVKIYSTNIESEGRPNLNLT
CCCEEECCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCC
AEEIAEMANELDILIGPAHAFTPWTSLYKEYDSLKDAYGDAKIDFLELGLSADSDMADMI
HHHHHHHHHCCEEEEECCHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH
KAHHSIPYLSNSDAHSPNPHRLGREFNRFEVKDVTFEEIRKAIKGVGGRKIMLNAGLDPR
HHHHCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCC
LGKYHLTACSRCYTKYTLQDAVSLSWKCPKCGGIIKKGVRDRILELADTSEKPKDRPPYV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE
RLAPLAEIIAMVLGKGIESKAVKLLWNRFLREFGSEIRVLIDLPIESIASVHEGVAKAIW
EEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
AYRNNKLIIVPGGGGKYGEIRIPEEILKAKIEDLNSIEISGGEAELPKPKQRTLLQYIKN
HCCCCEEEEEECCCCCCCCEECCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHC
KEVN
CCCC
>Mature Secondary Structure
MIVDGDLHIHSHYSKAVSKLMTFPIIAENAKLKGLNLVGTGDSLNPHWEKELLKHSKPID
CEECCCEEEHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCC
DGTFEVNGVKFILTCEVEDKRRVHHLLIFPTLSQVREFREKVKIYSTNIESEGRPNLNLT
CCCEEECCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCC
AEEIAEMANELDILIGPAHAFTPWTSLYKEYDSLKDAYGDAKIDFLELGLSADSDMADMI
HHHHHHHHHCCEEEEECCHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH
KAHHSIPYLSNSDAHSPNPHRLGREFNRFEVKDVTFEEIRKAIKGVGGRKIMLNAGLDPR
HHHHCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCC
LGKYHLTACSRCYTKYTLQDAVSLSWKCPKCGGIIKKGVRDRILELADTSEKPKDRPPYV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE
RLAPLAEIIAMVLGKGIESKAVKLLWNRFLREFGSEIRVLIDLPIESIASVHEGVAKAIW
EEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
AYRNNKLIIVPGGGGKYGEIRIPEEILKAKIEDLNSIEISGGEAELPKPKQRTLLQYIKN
HCCCCEEEEEECCCCCCCCEECCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHC
KEVN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]