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The map label for this gene is 18977860

Identifier: 18977860

GI number: 18977860

Start: 1389982

End: 1390650

Strand: Direct

Name: 18977860

Synonym: PF1488

Alternate gene names: NA

Gene position: 1389982-1390650 (Clockwise)

Preceding gene: 18977858

Following gene: 18977861

Centisome position: 72.84

GC content: 39.01

Gene sequence:

>669_bases
ATGTTGGAAGGATATTACATTATTGAAAACCCAGGAGTAGTGCCCTCGGAAAGAAGGTTTAGAATGAAAGACCTAAAGGC
TTGGGGATATGATTTACACCTCGGAACAATTGAAGGAGAAAGAGCATATTTTGTTTCTAGAACAGGAGAAAGAGAAGAGG
GTGAAACATACTCACTGCAAGGAAAAACTTATCATATTGAAAAAACAGAAAAAGAAATTCCTGAAAATGCAAGATTGCTT
GCAAGGATTGTAATTGAAAGAGGACAACCTTATTTAGAGTTCTGGCTGGAAGAAGAAGATACAGTATATCCACTAGCAAA
GGAAGACCCAAGAATAATCTTAAAGAGATTATGGGAAAAGGAAAAGCTAAACCAACTTTTAAAACATGTGAGGGCCGTAG
GACTTACAACGGACTTTTACAAGGATACTGTCTTCATAAAGTCCATACCCCTGCCATACGAGGAATACCCACCCAAAGTG
AGGAGGGTTCTCAGAGAAGTAAGAGATATCCACAGAGATATCATGGGGTTTGGAAGATTTGTATTCCAGTACTTTGGAGA
AGAAAATAAAACTCACAACTATCGCCTTCACTGGACGCTTCCTACTCTTCACCTGTTTGATGTAGAAATTGCCAACGAAA
TTGACAAGGTCCTTGGGATGCTTGACTAA

Upstream 100 bases:

>100_bases
ATAGAGTTCATGGAAGACCATATGGGAAGTGGAATAAATACTTTTCTCACCAAATGATTTAAAAAGGTAAAAGAATTTAA
TAACAAATGGTGAAGAAAAA

Downstream 100 bases:

>100_bases
AACTTAAAACAGAAAAAAACAGTAAATATCCATAAGGTGACTGCCATGCCACTTTTTCAATTTAGGGGTGGGAAAGATAA
AATCAAGAAACTCCTTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLEGYYIIENPGVVPSERRFRMKDLKAWGYDLHLGTIEGERAYFVSRTGEREEGETYSLQGKTYHIEKTEKEIPENARLL
ARIVIERGQPYLEFWLEEEDTVYPLAKEDPRIILKRLWEKEKLNQLLKHVRAVGLTTDFYKDTVFIKSIPLPYEEYPPKV
RRVLREVRDIHRDIMGFGRFVFQYFGEENKTHNYRLHWTLPTLHLFDVEIANEIDKVLGMLD

Sequences:

>Translated_222_residues
MLEGYYIIENPGVVPSERRFRMKDLKAWGYDLHLGTIEGERAYFVSRTGEREEGETYSLQGKTYHIEKTEKEIPENARLL
ARIVIERGQPYLEFWLEEEDTVYPLAKEDPRIILKRLWEKEKLNQLLKHVRAVGLTTDFYKDTVFIKSIPLPYEEYPPKV
RRVLREVRDIHRDIMGFGRFVFQYFGEENKTHNYRLHWTLPTLHLFDVEIANEIDKVLGMLD
>Mature_222_residues
MLEGYYIIENPGVVPSERRFRMKDLKAWGYDLHLGTIEGERAYFVSRTGEREEGETYSLQGKTYHIEKTEKEIPENARLL
ARIVIERGQPYLEFWLEEEDTVYPLAKEDPRIILKRLWEKEKLNQLLKHVRAVGLTTDFYKDTVFIKSIPLPYEEYPPKV
RRVLREVRDIHRDIMGFGRFVFQYFGEENKTHNYRLHWTLPTLHLFDVEIANEIDKVLGMLD

Specific function: Unknown

COG id: COG1851

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0128 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1488_PYRFU (Q8U0U4)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579217.1
- ProteinModelPortal:   Q8U0U4
- EnsemblBacteria:   EBPYRT00000005832
- GeneID:   1469364
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1488
- NMPDR:   fig|186497.1.peg.1535
- GeneTree:   EBGT00050000022597
- HOGENOM:   HBG538986
- OMA:   NTLVFET
- ProtClustDB:   PRK04205
- HAMAP:   MF_00264
- InterPro:   IPR005266
- PIRSF:   PIRSF016179
- ProDom:   PD023377
- TIGRFAMs:   TIGR00703

Pfam domain/function: PF03673 UPF0128

EC number: NA

Molecular weight: Translated: 26537; Mature: 26537

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGYYIIENPGVVPSERRFRMKDLKAWGYDLHLGTIEGERAYFVSRTGEREEGETYSLQ
CCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCCCEEEEC
GKTYHIEKTEKEIPENARLLARIVIERGQPYLEFWLEEEDTVYPLAKEDPRIILKRLWEK
CCEEEEECHHHHCCHHHHHHHHHHHHCCCHHEEEEECCCCCEECCCCCCHHHHHHHHHHH
EKLNQLLKHVRAVGLTTDFYKDTVFIKSIPLPYEEYPPKVRRVLREVRDIHRDIMGFGRF
HHHHHHHHHHHHHCCCHHHHHCEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VFQYFGEENKTHNYRLHWTLPTLHLFDVEIANEIDKVLGMLD
HHHHHCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEGYYIIENPGVVPSERRFRMKDLKAWGYDLHLGTIEGERAYFVSRTGEREEGETYSLQ
CCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCCCEEEEC
GKTYHIEKTEKEIPENARLLARIVIERGQPYLEFWLEEEDTVYPLAKEDPRIILKRLWEK
CCEEEEECHHHHCCHHHHHHHHHHHHCCCHHEEEEECCCCCEECCCCCCHHHHHHHHHHH
EKLNQLLKHVRAVGLTTDFYKDTVFIKSIPLPYEEYPPKVRRVLREVRDIHRDIMGFGRF
HHHHHHHHHHHHHCCCHHHHHCEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VFQYFGEENKTHNYRLHWTLPTLHLFDVEIANEIDKVLGMLD
HHHHHCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA