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The map label for this gene is 18977710

Identifier: 18977710

GI number: 18977710

Start: 1258479

End: 1259123

Strand: Reverse

Name: 18977710

Synonym: PF1338

Alternate gene names: NA

Gene position: 1259123-1258479 (Counterclockwise)

Preceding gene: 18977711

Following gene: 18977709

Centisome position: 65.98

GC content: 44.19

Gene sequence:

>645_bases
ATGATAACGGCTAGGCTTAGAGAAGAGGCCACTGAAATATGGGAAAAGATATTTAAGCACGATTTTGTAGCTCAGCTTTA
CGAGGGAACACTTCCCCTTGACAAGTTCAAGTTCTACATCCTTCAAGACTTCAACTATTTGGTTGGTCTCTCAAGAGCCT
TGGCAGTAATAGCCTCAAAAGCCGAATATCCCCTTATGGCAGAAATACTCGAGCTAGCAAGGGCTGAGATAACAACTGAG
ATGAAAAACTATGAGGACTTGCTAAATAAACTTGGCTTTACACTCAAAGATGCGATTAAGGTTGAGCCTACCCTAGTGAA
CTCCGCCTACATGGACTTCATGCTCTCAACTGCTTACAGGGGAAGTGTGGTTGAAGGGTTGACAGCTCTTCTTCCATGCT
TTTGGAGTTATGCAGAGATTGCCGAATACCATAGAGAAAAGCTGGAGAGAAACCCAGTAAAGATTTATCGCGAGTGGGGG
GAGGTTTACCTTAGCGAAGAATATCTGAAGTTAGTCAAAAGGCTGAGGGAAATAATAGATTCCCAGGGAGGAGAATACGA
GAAGCTTAAAAGAATCTTCATCACTGGAAGCAAGTTTGAGCTCGCGTTCTGGGATATGGCCTGGAGGGGTGGCGATGTTT
TCTGA

Upstream 100 bases:

>100_bases
CTTTGTAAATTCTTTATTTTTTACACGTTTTTATAACTTGGTTTTTGGATATAACAAAAAAGTTATAAAAACTTGGGGAA
GATACATTACAGGGAGAAAC

Downstream 100 bases:

>100_bases
AGAGCTCATTAAAGAGAATGAGAATATATGGAGGAGGTTCCTCCCTCACAAATTTCTCATAGAGATGGCAGAAAATACCA
TAAAAAAGGAGAATTTCGAG

Product: transcriptional activator, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MITARLREEATEIWEKIFKHDFVAQLYEGTLPLDKFKFYILQDFNYLVGLSRALAVIASKAEYPLMAEILELARAEITTE
MKNYEDLLNKLGFTLKDAIKVEPTLVNSAYMDFMLSTAYRGSVVEGLTALLPCFWSYAEIAEYHREKLERNPVKIYREWG
EVYLSEEYLKLVKRLREIIDSQGGEYEKLKRIFITGSKFELAFWDMAWRGGDVF

Sequences:

>Translated_214_residues
MITARLREEATEIWEKIFKHDFVAQLYEGTLPLDKFKFYILQDFNYLVGLSRALAVIASKAEYPLMAEILELARAEITTE
MKNYEDLLNKLGFTLKDAIKVEPTLVNSAYMDFMLSTAYRGSVVEGLTALLPCFWSYAEIAEYHREKLERNPVKIYREWG
EVYLSEEYLKLVKRLREIIDSQGGEYEKLKRIFITGSKFELAFWDMAWRGGDVF
>Mature_214_residues
MITARLREEATEIWEKIFKHDFVAQLYEGTLPLDKFKFYILQDFNYLVGLSRALAVIASKAEYPLMAEILELARAEITTE
MKNYEDLLNKLGFTLKDAIKVEPTLVNSAYMDFMLSTAYRGSVVEGLTALLPCFWSYAEIAEYHREKLERNPVKIYREWG
EVYLSEEYLKLVKRLREIIDSQGGEYEKLKRIFITGSKFELAFWDMAWRGGDVF

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325378, Length=210, Percent_Identity=28.0952380952381, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324997, Length=210, Percent_Identity=27.6190476190476, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 25062; Mature: 25062

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITARLREEATEIWEKIFKHDFVAQLYEGTLPLDKFKFYILQDFNYLVGLSRALAVIASK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEYPLMAEILELARAEITTEMKNYEDLLNKLGFTLKDAIKVEPTLVNSAYMDFMLSTAYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHC
GSVVEGLTALLPCFWSYAEIAEYHREKLERNPVKIYREWGEVYLSEEYLKLVKRLREIID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGGEYEKLKRIFITGSKFELAFWDMAWRGGDVF
CCCCCHHHHHHHHCCCCCEEEHHHHHHCCCCCCC
>Mature Secondary Structure
MITARLREEATEIWEKIFKHDFVAQLYEGTLPLDKFKFYILQDFNYLVGLSRALAVIASK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEYPLMAEILELARAEITTEMKNYEDLLNKLGFTLKDAIKVEPTLVNSAYMDFMLSTAYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHC
GSVVEGLTALLPCFWSYAEIAEYHREKLERNPVKIYREWGEVYLSEEYLKLVKRLREIID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGGEYEKLKRIFITGSKFELAFWDMAWRGGDVF
CCCCCHHHHHHHHCCCCCEEEHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]