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The map label for this gene is nusA

Identifier: 18977586

GI number: 18977586

Start: 1155668

End: 1156165

Strand: Reverse

Name: nusA

Synonym: PF1214

Alternate gene names: NA

Gene position: 1156165-1155668 (Counterclockwise)

Preceding gene: 33359550

Following gene: 18977580

Centisome position: 60.59

GC content: 44.18

Gene sequence:

>498_bases
GTGAAGGCGCCGATCTGTGAGGTTTGTTTGAAAACCGAGGATATTCTCTGTCCTGCGGATGAAAAAAAGCTGGAGGAGGG
TATTATAACTGAGCTGGACGTTAAAATCTCAAGAATGCTCTACAAGTTGCTCGGAGATGCTGATGTGGAGTTCAAGAAGG
CAGTTGAGGCAGGAGATCTTATAGTTCTCATAGTGGGAGAAGGCGATGTTCCCATAGTTATTGGAAAGGGCGGGAAGAAC
ATAAAGTATCTCACTAGGGAGTTAGGAAAGAGGGTTAGGGTAATAGAGAGTACAGATGACGTTAAGAAGCTTGCTGTTGA
TCTACTTTACCCAGCTGGCGTCTTTGGCGTAAATGTTGTGTACAAGCCTGATGGTGGGCAATACTACAAAGTTTTAGTTT
TTAGCAGGGACAAGAGCAAGCTCCCAGAGAAGTCTGAAGTCCTCGAGAGCATATTAACTCAAATCACCGGCGTGGAGACA
AAGATATCCTTTATTTAA

Upstream 100 bases:

>100_bases
AAGACGAGCCAGAGGATTTCAATGCTATTATTTAAGAAAGATTTTTAAGTGCTCTTTGTGTAGTGGTTTTAGCCCTAATT
CTCAGCTGGAGGTGAGAAGA

Downstream 100 bases:

>100_bases
TTTTTTGGCAAAACTTTTAATAATTTTTTAGAGATTTATTTTTTGGCGAGTGATGATAGGGACTGGCACCGACGGATGAT
GAAATGTAAAGACGGAAAGA

Product: transcription elongation factor NusA-like protein

Products: NA

Alternate protein names: NusA-Like Protein; Transcription Elongation Factor NusA; Transcription Elongation Factor Nusa-Like Protein; Transcription Elongation Factor

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKAPICEVCLKTEDILCPADEKKLEEGIITELDVKISRMLYKLLGDADVEFKKAVEAGDLIVLIVGEGDVPIVIGKGGKN
IKYLTRELGKRVRVIESTDDVKKLAVDLLYPAGVFGVNVVYKPDGGQYYKVLVFSRDKSKLPEKSEVLESILTQITGVET
KISFI

Sequences:

>Translated_165_residues
MKAPICEVCLKTEDILCPADEKKLEEGIITELDVKISRMLYKLLGDADVEFKKAVEAGDLIVLIVGEGDVPIVIGKGGKN
IKYLTRELGKRVRVIESTDDVKKLAVDLLYPAGVFGVNVVYKPDGGQYYKVLVFSRDKSKLPEKSEVLESILTQITGVET
KISFI
>Mature_165_residues
MKAPICEVCLKTEDILCPADEKKLEEGIITELDVKISRMLYKLLGDADVEFKKAVEAGDLIVLIVGEGDVPIVIGKGGKN
IKYLTRELGKRVRVIESTDDVKKLAVDLLYPAGVFGVNVVYKPDGGQYYKVLVFSRDKSKLPEKSEVLESILTQITGVET
KISFI

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18218; Mature: 18218

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPICEVCLKTEDILCPADEKKLEEGIITELDVKISRMLYKLLGDADVEFKKAVEAGDL
CCCCHHHHHHCCCCEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCE
IVLIVGEGDVPIVIGKGGKNIKYLTRELGKRVRVIESTDDVKKLAVDLLYPAGVFGVNVV
EEEEECCCCEEEEECCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEEE
YKPDGGQYYKVLVFSRDKSKLPEKSEVLESILTQITGVETKISFI
EECCCCCEEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MKAPICEVCLKTEDILCPADEKKLEEGIITELDVKISRMLYKLLGDADVEFKKAVEAGDL
CCCCHHHHHHCCCCEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCE
IVLIVGEGDVPIVIGKGGKNIKYLTRELGKRVRVIESTDDVKKLAVDLLYPAGVFGVNVV
EEEEECCCCEEEEECCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEEE
YKPDGGQYYKVLVFSRDKSKLPEKSEVLESILTQITGVETKISFI
EECCCCCEEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA