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The map label for this gene is 18977563

Identifier: 18977563

GI number: 18977563

Start: 1136394

End: 1137179

Strand: Reverse

Name: 18977563

Synonym: PF1191

Alternate gene names: NA

Gene position: 1137179-1136394 (Counterclockwise)

Preceding gene: 18977564

Following gene: 18977559

Centisome position: 59.59

GC content: 38.93

Gene sequence:

>786_bases
GTGGATTTGAGGAAGTCCAAGGAGCTAACTGGAATTGAGGCTCACATAAATGATAACAAGAAGGAGGAATCTAACGTGGA
ATATTTTGAGAAGTTGAGAAGTGCTCTTTTGGATGGGGTAAATAAGGGAAGATCTTTACTAAAGCACTTGCCAGTAACGA
GAATAGAAGGACAATCATTCAGGGTTGACATCATTAAATTTGAAGATGGTGTTAGGGTAGTAAAGCAAGAGTACAAGCCA
ATTCCATTATTGAAGAAGAAATTCTATGTGGGAATAAGAGAACTCAACGATGGGACTTACGATGTATCTATAGCAACTAA
AGCTGGGGAACTCCTAGTTAAAGACGAAGAGTCGCTAGTAATAAGAGAAATTCTATCCACAGAGGGAATTAAGAAAATGA
AACTTTCCTCCTGGGACAATCCAGAAGAAGCACTTAATGATTTAATGAACGCACTGCAGGAAGCCTCAAATGCGTCAGCT
GGACCATTTGGGCTGATAATTAACCCAAAAAGATATGCAAAGTTGCTAAAAATTTACGAGAAGAGTGGAAAGATGCTAGT
TGAAGTGCTAAAAGAGATATTCAGGGGAGGAATCATTGTTACTCTAAACATTGATGAGAATAAGGTAATAATATTTGCCA
ATACACCAGCTGTTCTTGACGTTGTAGTTGGCCAAGATGTGACTCTACAAGAGCTAGGACCTGAAGGAGACGACGTTGCA
TTCTTGGTTAGTGAAGCTATAGGAATAAGAATAAAGAACCCAGAGGCAATAGTAGTCTTAGAGTGA

Upstream 100 bases:

>100_bases
AAGATTCTCCTTGATGTTGCAAGGGAGGAGAAGGCTCACGTTGGAGAATTCATGGCACTCCTTCTAAATTTGGATCCAGA
ACAAGTAACTGAGCTGAAGG

Downstream 100 bases:

>100_bases
AGTTCACGGCCCTATGTGCATCATTTGGCTGTACATTTCCCAATTGAGCAATAGCTCGTACTCGGCCCTTAAGGTGTAGT
AGTGCCCTCTTTCCATATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Rubrerythrin; Linocin/CFP29-Like Protein; Linocin

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDLRKSKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQEYKP
IPLLKKKFYVGIRELNDGTYDVSIATKAGELLVKDEESLVIREILSTEGIKKMKLSSWDNPEEALNDLMNALQEASNASA
GPFGLIINPKRYAKLLKIYEKSGKMLVEVLKEIFRGGIIVTLNIDENKVIIFANTPAVLDVVVGQDVTLQELGPEGDDVA
FLVSEAIGIRIKNPEAIVVLE

Sequences:

>Translated_261_residues
MDLRKSKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQEYKP
IPLLKKKFYVGIRELNDGTYDVSIATKAGELLVKDEESLVIREILSTEGIKKMKLSSWDNPEEALNDLMNALQEASNASA
GPFGLIINPKRYAKLLKIYEKSGKMLVEVLKEIFRGGIIVTLNIDENKVIIFANTPAVLDVVVGQDVTLQELGPEGDDVA
FLVSEAIGIRIKNPEAIVVLE
>Mature_261_residues
MDLRKSKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSFRVDIIKFEDGVRVVKQEYKP
IPLLKKKFYVGIRELNDGTYDVSIATKAGELLVKDEESLVIREILSTEGIKKMKLSSWDNPEEALNDLMNALQEASNASA
GPFGLIINPKRYAKLLKIYEKSGKMLVEVLKEIFRGGIIVTLNIDENKVIIFANTPAVLDVVVGQDVTLQELGPEGDDVA
FLVSEAIGIRIKNPEAIVVLE

Specific function: Unknown

COG id: COG1659

COG function: function code S; Uncharacterized protein, linocin/CFP29 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29146; Mature: 29146

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRKSKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSF
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
RVDIIKFEDGVRVVKQEYKPIPLLKKKFYVGIRELNDGTYDVSIATKAGELLVKDEESLV
EEEEEEECCCHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEEEECCCCEEEECCHHHH
IREILSTEGIKKMKLSSWDNPEEALNDLMNALQEASNASAGPFGLIINPKRYAKLLKIYE
HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHH
KSGKMLVEVLKEIFRGGIIVTLNIDENKVIIFANTPAVLDVVVGQDVTLQELGPEGDDVA
HCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCEEEEECCCCEEHHHCCCCCCCHH
FLVSEAIGIRIKNPEAIVVLE
EEEEHHHEEEECCCCEEEEEC
>Mature Secondary Structure
MDLRKSKELTGIEAHINDNKKEESNVEYFEKLRSALLDGVNKGRSLLKHLPVTRIEGQSF
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
RVDIIKFEDGVRVVKQEYKPIPLLKKKFYVGIRELNDGTYDVSIATKAGELLVKDEESLV
EEEEEEECCCHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEEEECCCCEEEECCHHHH
IREILSTEGIKKMKLSSWDNPEEALNDLMNALQEASNASAGPFGLIINPKRYAKLLKIYE
HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHH
KSGKMLVEVLKEIFRGGIIVTLNIDENKVIIFANTPAVLDVVVGQDVTLQELGPEGDDVA
HCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCEEEEECCCCEEHHHCCCCCCCHH
FLVSEAIGIRIKNPEAIVVLE
EEEEHHHEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA