| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977481
Identifier: 18977481
GI number: 18977481
Start: 1055952
End: 1058861
Strand: Direct
Name: 18977481
Synonym: PF1109
Alternate gene names: NA
Gene position: 1055952-1058861 (Clockwise)
Preceding gene: 18977480
Following gene: 18977482
Centisome position: 55.34
GC content: 44.57
Gene sequence:
>2910_bases ATGAGAAGGAATGCCCAGGTCTTTGCTATGGTGCTCTTATTAGTACTTTCAGGAATTCCCAAGGCGCTTGCACTGTACAC TCCAACACCGTTTTCAATAGATGGAAACTTAGAGGAATGGATCAAAGCAGATGCTATTGCTTATGGAAGAGACTCCGGCC TTCCAGGAGCAAACCTTGACAAATTGTACATTGCCTGGGATGACAACTATCTTTACATTGCCATAAAGACTAACAATACC CAGAGTTGGGACCTAGCTTATGGAATTGGAATTGACGTAGACCCAGGAAGTGGAAACGGATACACCGGAGACTCAGACGC ATGGGGAAGAAAAATAGCCTTTGGAAACAACTATGCCATAGATTATGAGATTTACTTCTGGTGGAGTGGTGGTAGTGGAA TTACTGCTGACAACTTCATAAACTGGACTGGCTCAGGATGGGACTACAAGAGCATTAGTGATGTCGGAGGAAGCTTCGCA TACACTGGAGACACAAGCCAAGGACTACAAACCCTAGAAATAGCAATACCATGGGACGCATTGGGTGGAATTACAAGAAA ATTTGCCATAATTGCTTGGATTGCTGGTGGAGATGGAAGTAGCGCAGTTGATTCACTACCCGTTGATGACACCATTGTAG ACAGCGATAACGAGTGGGTTGATCAAGATGTATTCACGAACCTAAGTGTAATAATGCTATCTCCAAAGAATATCGATGGA AGCTTAGATGATTGGGCAGACTATGAAAAGGTTGGCTCTTCACTTCCAAGTGGGTATCCTGGAGCTGACCTAGAGAGCCT ATATGTCTCCTGGGACAGTAATTATCTCTATATTGCCATAAAGACTAACAACACTGCAAGCTGGGATGTTGCTTATGGAA TTGGAATTGACGTAGACCCAGGAAGTGGAAACGGATACACCGGAGACACAGATGCTTGGGGTAGGAAGATTGGATTCCAA GGATTTGCAGTTGACTACGAGATTTACTTCTGGTGGAGTGGTGGTAGTGGAATTACTGCTGACAACTTCATAAACTGGAC TGGCTCAGGATGGGACTACAAGAGCATTAGTGATGTCGGAGGAAGCTTCGCATACACTGGAGACACAAGCCAAGGACTAC AAACCCTAGAAATAGCAATACCATGGGACGCATTGGGTGGAATTACAAGAAAATTTGCCATAATTGCTTGGATTGCTGGT GGAGATGGAAGTAGCGCAGTTGACACAGCTCCCTCAGACTCCGAAGTGCCTCCAGGAGACTCATGGACAGATTATGACAA GCTCTCTAACTTGGCAACAACATTTGAGTTCCCTGACTTGACTGTCGAGATTAAGGGTCCAGATGTTGTTGGAGTGAATA AGCTTGCAGAGTATGAGGTGCATGTGAAGAACCTTGGTGGAATAGGAGTTCCTTCAACAAAAGTTAGGGTTTACATAAAC GGAACACTCTATAAGAACTGGACAGTATCTCTTGGACCAAAAGAAGAGAAAGTTCTAACATTTAACTGGACACCAACTCA GGAAGGAATGTACAGAATCAACGCCACTGTAGATGAAGAAAATACCGTCGTTGAGCTCAACGAAAACAATAACGTTGCAA CATTTGATGTTAGTGTTGTCTGGGTTGGAAAGATAAGCGTCGATGGAGATCCAAGCGACTGGCCGGAAGTAAGCCTTAAC AACAACACCTTTACCTTACAGAATGGAGTATTCATATGGAGCGATGCTCCAGATGATCAGAGAACGGAGAAGGATCCCTA CCTCCCAGGAGGAACTTCATCTCATGCAGACTTAATTAAATTTGGCGTGGCAAAAGACGAGAGATATCTGTACTTCCTTT TCGTCTTCAAGAACATGAGCAACATAAAGATCGGAGATAACGGAGCAACCTTCATAGCAGTTCCAATTGACTTCAAGGAA GGAGGAGCAACAGAGTTTGCTGGCGAGATGGATACTAAGAGCATACTAGAATGGGACATCCAAGTTGTAGTCAACTTAGC CTCAAGCCAGTTCAGTGGTGAGAGGGTTGCAACAACAAAAGCTGGTTCAAGCTATGAATCACTCTTCTACGTTCTATCCG CTGACGGAAGTTTCATTACAAGTGATGACGCAATGGTGGGAGTGAACCTCGATGCCAACACAGTAGAGGTCAGAATTCCA CTAAGCTTCATTGAGAATTCTGATGAGATAAGGCTTCAGCTTGCCACTGGCTTCAGCTATGGGCCAGCAGTATGGAACTT TGGAGATCCATTTGCAAACGATGATGTGAGCGATATAGTGGACACGATAAGCGAGGCTGGCACTGAGGAAGAGCTTTCAG ACAACATCCCAGACTACTATGTAAAGCTACTGCTAGGCACATATCTAGTTGAAGGGGCAGACGTCATTAATTACAGAGAA GAGAGAATAATGATGCAACAACAAGCCGCAGTGAAGTCCTTCATGACGATCTCCAAGTATTACGGAATTCCAAGGTTCAA GAAAGAATACGCCACATATCTAGAGCTCATGAACAACATAACGAACATGGATATCCCAGAAGAGTTCAAGGAAGAGATAA TTGAGATAAGGAAGAAGGTTGACGAGCTGTTCTCCCTCTACAAGGAAGGAAAGGAAGTTGCAGAGGAGGGAATGATGAGC TTAGCAGATGCAATTAAGCTATACAGGGCATATACAGGAATGATAAAGGTTAATCAGAGGCTTAAGGAAATCATCCAGGC AATAGCCTCTGGAGAGCTCGAGAGACAGAAGTGGTTGGAGGAGATGAGGGGCAAGCTCACAAAGACAATTGACGGAGATC TCTCAGACTGGAGCGTTGATCCAGTTGCCGTAGATACAGAAGGGTACGGTCAGGATGGTGCAAACTTAAGGAGTTGTACG TGGACTACGACGACAACTTCCTCTACATAG
Upstream 100 bases:
>100_bases GCCGTTCTGTGGCTCTTTGAAGAGTAGCTTTTATGCACATATTTAGACCCAACAAAATATTTAAACTTCTCAGTGACTAA ATATCACTTGAGGTGACACC
Downstream 100 bases:
>100_bases CATTCACAACGGACAACAAAGCATCATGGAGAATAGCATATGGAGTTGCCTTGGACTACAAGGAGGGGGGATACACAACC GGACAGGATGGATGGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 969; Mature: 969
Protein sequence:
>969_residues MRRNAQVFAMVLLLVLSGIPKALALYTPTPFSIDGNLEEWIKADAIAYGRDSGLPGANLDKLYIAWDDNYLYIAIKTNNT QSWDLAYGIGIDVDPGSGNGYTGDSDAWGRKIAFGNNYAIDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFA YTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAGGDGSSAVDSLPVDDTIVDSDNEWVDQDVFTNLSVIMLSPKNIDG SLDDWADYEKVGSSLPSGYPGADLESLYVSWDSNYLYIAIKTNNTASWDVAYGIGIDVDPGSGNGYTGDTDAWGRKIGFQ GFAVDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFAYTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAG GDGSSAVDTAPSDSEVPPGDSWTDYDKLSNLATTFEFPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN GTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDEENTVVELNENNNVATFDVSVVWVGKISVDGDPSDWPEVSLN NNTFTLQNGVFIWSDAPDDQRTEKDPYLPGGTSSHADLIKFGVAKDERYLYFLFVFKNMSNIKIGDNGATFIAVPIDFKE GGATEFAGEMDTKSILEWDIQVVVNLASSQFSGERVATTKAGSSYESLFYVLSADGSFITSDDAMVGVNLDANTVEVRIP LSFIENSDEIRLQLATGFSYGPAVWNFGDPFANDDVSDIVDTISEAGTEEELSDNIPDYYVKLLLGTYLVEGADVINYRE ERIMMQQQAAVKSFMTISKYYGIPRFKKEYATYLELMNNITNMDIPEEFKEEIIEIRKKVDELFSLYKEGKEVAEEGMMS LADAIKLYRAYTGMIKVNQRLKEIIQAIASGELERQKWLEEMRGKLTKTIDGDLSDWSVDPVAVDTEGYGQDGANLRSCT WTTTTTSST
Sequences:
>Translated_969_residues MRRNAQVFAMVLLLVLSGIPKALALYTPTPFSIDGNLEEWIKADAIAYGRDSGLPGANLDKLYIAWDDNYLYIAIKTNNT QSWDLAYGIGIDVDPGSGNGYTGDSDAWGRKIAFGNNYAIDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFA YTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAGGDGSSAVDSLPVDDTIVDSDNEWVDQDVFTNLSVIMLSPKNIDG SLDDWADYEKVGSSLPSGYPGADLESLYVSWDSNYLYIAIKTNNTASWDVAYGIGIDVDPGSGNGYTGDTDAWGRKIGFQ GFAVDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFAYTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAG GDGSSAVDTAPSDSEVPPGDSWTDYDKLSNLATTFEFPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN GTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDEENTVVELNENNNVATFDVSVVWVGKISVDGDPSDWPEVSLN NNTFTLQNGVFIWSDAPDDQRTEKDPYLPGGTSSHADLIKFGVAKDERYLYFLFVFKNMSNIKIGDNGATFIAVPIDFKE GGATEFAGEMDTKSILEWDIQVVVNLASSQFSGERVATTKAGSSYESLFYVLSADGSFITSDDAMVGVNLDANTVEVRIP LSFIENSDEIRLQLATGFSYGPAVWNFGDPFANDDVSDIVDTISEAGTEEELSDNIPDYYVKLLLGTYLVEGADVINYRE ERIMMQQQAAVKSFMTISKYYGIPRFKKEYATYLELMNNITNMDIPEEFKEEIIEIRKKVDELFSLYKEGKEVAEEGMMS LADAIKLYRAYTGMIKVNQRLKEIIQAIASGELERQKWLEEMRGKLTKTIDGDLSDWSVDPVAVDTEGYGQDGANLRSCT WTTTTTSST >Mature_969_residues MRRNAQVFAMVLLLVLSGIPKALALYTPTPFSIDGNLEEWIKADAIAYGRDSGLPGANLDKLYIAWDDNYLYIAIKTNNT QSWDLAYGIGIDVDPGSGNGYTGDSDAWGRKIAFGNNYAIDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFA YTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAGGDGSSAVDSLPVDDTIVDSDNEWVDQDVFTNLSVIMLSPKNIDG SLDDWADYEKVGSSLPSGYPGADLESLYVSWDSNYLYIAIKTNNTASWDVAYGIGIDVDPGSGNGYTGDTDAWGRKIGFQ GFAVDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFAYTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAG GDGSSAVDTAPSDSEVPPGDSWTDYDKLSNLATTFEFPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN GTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDEENTVVELNENNNVATFDVSVVWVGKISVDGDPSDWPEVSLN NNTFTLQNGVFIWSDAPDDQRTEKDPYLPGGTSSHADLIKFGVAKDERYLYFLFVFKNMSNIKIGDNGATFIAVPIDFKE GGATEFAGEMDTKSILEWDIQVVVNLASSQFSGERVATTKAGSSYESLFYVLSADGSFITSDDAMVGVNLDANTVEVRIP LSFIENSDEIRLQLATGFSYGPAVWNFGDPFANDDVSDIVDTISEAGTEEELSDNIPDYYVKLLLGTYLVEGADVINYRE ERIMMQQQAAVKSFMTISKYYGIPRFKKEYATYLELMNNITNMDIPEEFKEEIIEIRKKVDELFSLYKEGKEVAEEGMMS LADAIKLYRAYTGMIKVNQRLKEIIQAIASGELERQKWLEEMRGKLTKTIDGDLSDWSVDPVAVDTEGYGQDGANLRSCT WTTTTTSST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106544; Mature: 106544
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNAQVFAMVLLLVLSGIPKALALYTPTPFSIDGNLEEWIKADAIAYGRDSGLPGANLD CCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCHHHHHHHHHEEECCCCCCCCCCCC KLYIAWDDNYLYIAIKTNNTQSWDLAYGIGIDVDPGSGNGYTGDSDAWGRKIAFGNNYAI EEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCEEE DYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFAYTGDTSQGLQTLEIAIPWDA EEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHCCCCEEECCCCCCCCEEEEEEECHHH LGGITRKFAIIAWIAGGDGSSAVDSLPVDDTIVDSDNEWVDQDVFTNLSVIMLSPKNIDG HCCHHEEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCEEEEEECCCCCCC SLDDWADYEKVGSSLPSGYPGADLESLYVSWDSNYLYIAIKTNNTASWDVAYGIGIDVDP CCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECC GSGNGYTGDTDAWGRKIGFQGFAVDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVG CCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHCC GSFAYTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAGGDGSSAVDTAPSDSEVPPGD CCEEECCCCCCCCEEEEEEECHHHHCCHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC SWTDYDKLSNLATTFEFPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN CCCCHHHHHHHEEEEECCCEEEEECCCCEECCCHHEEEEEEEECCCCCCCCCCEEEEEEE GTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDEENTVVELNENNNVATFDVSVV EEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEE WVGKISVDGDPSDWPEVSLNNNTFTLQNGVFIWSDAPDDQRTEKDPYLPGGTSSHADLIK EEEEEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHE FGVAKDERYLYFLFVFKNMSNIKIGDNGATFIAVPIDFKEGGATEFAGEMDTKSILEWDI ECCCCCCCEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHEE QVVVNLASSQFSGERVATTKAGSSYESLFYVLSADGSFITSDDAMVGVNLDANTVEVRIP EHEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEECCCCEEEEECCCCEEEEEEE LSFIENSDEIRLQLATGFSYGPAVWNFGDPFANDDVSDIVDTISEAGTEEELSDNIPDYY HHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHH VKLLLGTYLVEGADVINYREERIMMQQQAAVKSFMTISKYYGIPRFKKEYATYLELMNNI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC TNMDIPEEFKEEIIEIRKKVDELFSLYKEGKEVAEEGMMSLADAIKLYRAYTGMIKVNQR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEIIQAIASGELERQKWLEEMRGKLTKTIDGDLSDWSVDPVAVDTEGYGQDGANLRSCT HHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE WTTTTTSST EEEECCCCC >Mature Secondary Structure MRRNAQVFAMVLLLVLSGIPKALALYTPTPFSIDGNLEEWIKADAIAYGRDSGLPGANLD CCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCHHHHHHHHHEEECCCCCCCCCCCC KLYIAWDDNYLYIAIKTNNTQSWDLAYGIGIDVDPGSGNGYTGDSDAWGRKIAFGNNYAI EEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCEEE DYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVGGSFAYTGDTSQGLQTLEIAIPWDA EEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHCCCCEEECCCCCCCCEEEEEEECHHH LGGITRKFAIIAWIAGGDGSSAVDSLPVDDTIVDSDNEWVDQDVFTNLSVIMLSPKNIDG HCCHHEEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCEEEEEECCCCCCC SLDDWADYEKVGSSLPSGYPGADLESLYVSWDSNYLYIAIKTNNTASWDVAYGIGIDVDP CCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECC GSGNGYTGDTDAWGRKIGFQGFAVDYEIYFWWSGGSGITADNFINWTGSGWDYKSISDVG CCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHCC GSFAYTGDTSQGLQTLEIAIPWDALGGITRKFAIIAWIAGGDGSSAVDTAPSDSEVPPGD CCEEECCCCCCCCEEEEEEECHHHHCCHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC SWTDYDKLSNLATTFEFPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN CCCCHHHHHHHEEEEECCCEEEEECCCCEECCCHHEEEEEEEECCCCCCCCCCEEEEEEE GTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDEENTVVELNENNNVATFDVSVV EEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEE WVGKISVDGDPSDWPEVSLNNNTFTLQNGVFIWSDAPDDQRTEKDPYLPGGTSSHADLIK EEEEEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHE FGVAKDERYLYFLFVFKNMSNIKIGDNGATFIAVPIDFKEGGATEFAGEMDTKSILEWDI ECCCCCCCEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHEE QVVVNLASSQFSGERVATTKAGSSYESLFYVLSADGSFITSDDAMVGVNLDANTVEVRIP EHEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEECCCCEEEEECCCCEEEEEEE LSFIENSDEIRLQLATGFSYGPAVWNFGDPFANDDVSDIVDTISEAGTEEELSDNIPDYY HHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHH VKLLLGTYLVEGADVINYREERIMMQQQAAVKSFMTISKYYGIPRFKKEYATYLELMNNI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC TNMDIPEEFKEEIIEIRKKVDELFSLYKEGKEVAEEGMMSLADAIKLYRAYTGMIKVNQR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEIIQAIASGELERQKWLEEMRGKLTKTIDGDLSDWSVDPVAVDTEGYGQDGANLRSCT HHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE WTTTTTSST EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA