| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977421
Identifier: 18977421
GI number: 18977421
Start: 1001903
End: 1002916
Strand: Direct
Name: 18977421
Synonym: PF1049
Alternate gene names: NA
Gene position: 1001903-1002916 (Clockwise)
Preceding gene: 18977419
Following gene: 33359534
Centisome position: 52.5
GC content: 40.83
Gene sequence:
>1014_bases ATGGGAGCGAGGGAGGCCTTACCAAAGTACTTCTCAATCCTCGAAGGAGAGGAGTTGCCTAACTTCCTCTTAGCAAGGAA AATCGCTGTTAATTTTGATCCTTCCTCTCCTCTAGAGGAACTTTGGGCTATTCACGATGAAGGAATGGAAAAGTTGAGAG AGAATAATCTATCAGAAAACCCCGAGAAAAATTTGCTTGACTTAAAGAGCGTTATAGCATCAAAAATAATTGAGAAATGC CATCTTTGTGAAATTAGGTGTGGTGTAAACAGGAAGGAGCAGGTAGGGTATTGTAGAGTTAAGGAAAGTCTAATAGCAAG TGATTTTCTTCACTATGGTGAAGAGCCAGAGCTTGTTCCTTCCTATACGATATTCTTCTCAGGTTGCAATTTTAGATGTG TTTTCTGTCAAAACTGGGACATCAGTCAGTTCAGAGTTGGAGTTGAACTTTTGCCAGAATATTTAGCACTAAAAATTGAA AGGGCATACAGGTTTGGTGCGAGAAACGTTAACTTCGTTGGAGGCGAACCCACACCTAATCTACCCTATATACTAGAGAC GTTAAGATACGTTAATGTTCCAATTCCAGTTGTGTGGAATTCCAATATGTACATGAGCGAGGAGGCAATGAAGCTCCTAG ACGGTATAGTTGACGTTTATCTGGGAGACTTTAAGTATGGAAATAATAACTGCGCTCGCAGATATTCCAAGATTCCCAAC TATTGGGAGATTGTTACGAGAAACTTTTTGCTAGCGAAGAAACACTTCAGGGCCGAATTCCTCATTAGGCATTTGGTAAT GCCAAATCATCTAGAGTGTTGCACCGAGCCAGTACTCAAGTGGATAGCGGAAAACTTGGGGAGGGATGTTCGAGTTAATG TCATGTTCCAATACAGGCCTGAGTACAAAGCCAAAAACTACAAAGAGATTTCACGAGTATTGACAATAGAGGAAATGGAA AAAGCAGAAAAACTTGTAAAGAAGTACGGTTTCAAGAATGCCCTTGTTGGGTGA
Upstream 100 bases:
>100_bases TTCCATAACCTCAGCCGGTAGGTGGTTCATCATCTTTCAGCCGGGAGTAGCTCATCATCTGCCATAATTTTTTAACGGCC TTACTTCATAAACTTAATTG
Downstream 100 bases:
>100_bases ATGATATGTTAAACGTAACAAAAGGGAAAGAGATAAGGATAGAGGTGAGATTTGCCGACAATTTTATCAAGAGGTTTTTG GGCTTGATGTTTAGAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MGAREALPKYFSILEGEELPNFLLARKIAVNFDPSSPLEELWAIHDEGMEKLRENNLSENPEKNLLDLKSVIASKIIEKC HLCEIRCGVNRKEQVGYCRVKESLIASDFLHYGEEPELVPSYTIFFSGCNFRCVFCQNWDISQFRVGVELLPEYLALKIE RAYRFGARNVNFVGGEPTPNLPYILETLRYVNVPIPVVWNSNMYMSEEAMKLLDGIVDVYLGDFKYGNNNCARRYSKIPN YWEIVTRNFLLAKKHFRAEFLIRHLVMPNHLECCTEPVLKWIAENLGRDVRVNVMFQYRPEYKAKNYKEISRVLTIEEME KAEKLVKKYGFKNALVG
Sequences:
>Translated_337_residues MGAREALPKYFSILEGEELPNFLLARKIAVNFDPSSPLEELWAIHDEGMEKLRENNLSENPEKNLLDLKSVIASKIIEKC HLCEIRCGVNRKEQVGYCRVKESLIASDFLHYGEEPELVPSYTIFFSGCNFRCVFCQNWDISQFRVGVELLPEYLALKIE RAYRFGARNVNFVGGEPTPNLPYILETLRYVNVPIPVVWNSNMYMSEEAMKLLDGIVDVYLGDFKYGNNNCARRYSKIPN YWEIVTRNFLLAKKHFRAEFLIRHLVMPNHLECCTEPVLKWIAENLGRDVRVNVMFQYRPEYKAKNYKEISRVLTIEEME KAEKLVKKYGFKNALVG >Mature_336_residues GAREALPKYFSILEGEELPNFLLARKIAVNFDPSSPLEELWAIHDEGMEKLRENNLSENPEKNLLDLKSVIASKIIEKCH LCEIRCGVNRKEQVGYCRVKESLIASDFLHYGEEPELVPSYTIFFSGCNFRCVFCQNWDISQFRVGVELLPEYLALKIER AYRFGARNVNFVGGEPTPNLPYILETLRYVNVPIPVVWNSNMYMSEEAMKLLDGIVDVYLGDFKYGNNNCARRYSKIPNY WEIVTRNFLLAKKHFRAEFLIRHLVMPNHLECCTEPVLKWIAENLGRDVRVNVMFQYRPEYKAKNYKEISRVLTIEEMEK AEKLVKKYGFKNALVG
Specific function: Unknown
COG id: COG1313
COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016431 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 39262; Mature: 39131
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAREALPKYFSILEGEELPNFLLARKIAVNFDPSSPLEELWAIHDEGMEKLRENNLSEN CCCHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC PEKNLLDLKSVIASKIIEKCHLCEIRCGVNRKEQVGYCRVKESLIASDFLHYGEEPELVP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCC SYTIFFSGCNFRCVFCQNWDISQFRVGVELLPEYLALKIERAYRFGARNVNFVGGEPTPN CEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC LPYILETLRYVNVPIPVVWNSNMYMSEEAMKLLDGIVDVYLGDFKYGNNNCARRYSKIPN CHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCH YWEIVTRNFLLAKKHFRAEFLIRHLVMPNHLECCTEPVLKWIAENLGRDVRVNVMFQYRP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECC EYKAKNYKEISRVLTIEEMEKAEKLVKKYGFKNALVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GAREALPKYFSILEGEELPNFLLARKIAVNFDPSSPLEELWAIHDEGMEKLRENNLSEN CCHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC PEKNLLDLKSVIASKIIEKCHLCEIRCGVNRKEQVGYCRVKESLIASDFLHYGEEPELVP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCC SYTIFFSGCNFRCVFCQNWDISQFRVGVELLPEYLALKIERAYRFGARNVNFVGGEPTPN CEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC LPYILETLRYVNVPIPVVWNSNMYMSEEAMKLLDGIVDVYLGDFKYGNNNCARRYSKIPN CHHHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCH YWEIVTRNFLLAKKHFRAEFLIRHLVMPNHLECCTEPVLKWIAENLGRDVRVNVMFQYRP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECC EYKAKNYKEISRVLTIEEMEKAEKLVKKYGFKNALVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]