| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977368
Identifier: 18977368
GI number: 18977368
Start: 953631
End: 955040
Strand: Reverse
Name: 18977368
Synonym: PF0996
Alternate gene names: NA
Gene position: 955040-953631 (Counterclockwise)
Preceding gene: 18977371
Following gene: 18977367
Centisome position: 50.05
GC content: 38.79
Gene sequence:
>1410_bases GTGGCGGAAGACATCGAAGCTAAGATTAGAAGATTGAGAGAACTGGGAAAAATAGCTGAGAGTAAAGAAGAGACTCCAAC CCCAACTCCTGCTAAACCTCCAAGAAGAAGATTTTCAAGGATTGGGACCCTTAGAGAAAAGGAAAGAAGAAAAAGAGTCA TCATTGGTGCTGTTGTGTTATCAGTTATAATAATTGCGGGTGTTTTTGCTATATATATGTATTTTGAAAACAAAGCTGTT AGGGAGCTTGAAAATGCAAAAAATGCTAAAATAGCAGAGGTAAATGCTTGCTTTAAGGGAGAATTGGCCAACGATACAGT AAAATTCCAGCTCATAAACAAGATAATGGCAGCGAAAAGTATTGAAGAGCTTGAAAAAATTAACGTAAACCAAATCTGTG AACAAAGAAAGAAAGAGCTTGAAGAAGAGAGAATTAGAGCTGAACAGGAGAGATTGGCCAAAGAGTTAGCGCAACTTAAG AATGATACAAAAGAGTCTATAAAAGCAGCATTTGGTCCTTTATTGCAAGTAGAAGTTCCCGATGAAATTAAGAAGAAAAT AGTAAGTACACTCAACGATCTTCTGTCTAAGGTAGATAGTGCAAAAACCAAAGATGAAGTCCTAAGCATTAATGTAGAAG ATTATCTGCTACCTCTTTGGAAAGAGGTATACATTTACAAGATTGACTCAATGCCAACCTCTAAGGTCATCTTAAAGAAA GGTGAGGAAAAGAGGATGTATACAAAGGAAGAGGCAAAGCTTATTATCAATAGAATTGGCAGTCTAAGTGAGCTATTGGA ATATAACGTTGAAAAAGTAGAACTAGTGCAAGTCGCTCTAGTTCTCAGCAGGGAGAACGTAGTTGGAGGATTCATTGCCC CAGGAGATGAAGTGAAGGTGTATGCTAAGAATGGAACGACTTTCCGAGAAATTGTACCTGAGGGATACGTTGTTACAGCA CTACTCTCAACTGATGCTGGTAGGATAACGGTTAGTGAATCACAGCAACAAACAACAACGGCGTCTTCTACATCTTCAAC ATCCTCCCAACAAATATCATCGACGAGTTACTCTCCAGGTGATGTTACTTATCAGAATTCTCAGCAATCCCAGACCCAAT CTTCTGTAACACAAACCACAAGCGAGAGTTTGTCCTCAACTTATACCTATTCAGTCAACTTAGGGGAAATTCTCAAGGCT ATAGCGGCAGGAAAGATAAAGGCTCCTGAATCTGTTAGGGCTCAATTGAGCAATTATGGATGGGAAGTGCTTGATCTAGA ACAAGAATTTAAGTTCTTGGCATTACCAGAAGATACAAGATTGCTAGTAATAATTGAAGTTCCAAGTGAATTTGTACCCG AAATTCTTAACTGGAAAGACTCCATTGTGGTAGCAAAAGTCTCGAGGTGA
Upstream 100 bases:
>100_bases TTAAATTGATTTGGGTGAGATCATTATTTAGCAAAATCTTAAATAAAGGAAGAGATAAATAGATGTTATAGAGTTAAAGA TCACTACGGTGGTGTTGACA
Downstream 100 bases:
>100_bases TAACATGAGGAAAGGAATACTTATATTTACTCTTATTTCCTTTTTGCTACTTAACACTCCTGTATTAGCGCAGGAGCCTT TGAACAATATTGATTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MAEDIEAKIRRLRELGKIAESKEETPTPTPAKPPRRRFSRIGTLREKERRKRVIIGAVVLSVIIIAGVFAIYMYFENKAV RELENAKNAKIAEVNACFKGELANDTVKFQLINKIMAAKSIEELEKINVNQICEQRKKELEEERIRAEQERLAKELAQLK NDTKESIKAAFGPLLQVEVPDEIKKKIVSTLNDLLSKVDSAKTKDEVLSINVEDYLLPLWKEVYIYKIDSMPTSKVILKK GEEKRMYTKEEAKLIINRIGSLSELLEYNVEKVELVQVALVLSRENVVGGFIAPGDEVKVYAKNGTTFREIVPEGYVVTA LLSTDAGRITVSESQQQTTTASSTSSTSSQQISSTSYSPGDVTYQNSQQSQTQSSVTQTTSESLSSTYTYSVNLGEILKA IAAGKIKAPESVRAQLSNYGWEVLDLEQEFKFLALPEDTRLLVIIEVPSEFVPEILNWKDSIVVAKVSR
Sequences:
>Translated_469_residues MAEDIEAKIRRLRELGKIAESKEETPTPTPAKPPRRRFSRIGTLREKERRKRVIIGAVVLSVIIIAGVFAIYMYFENKAV RELENAKNAKIAEVNACFKGELANDTVKFQLINKIMAAKSIEELEKINVNQICEQRKKELEEERIRAEQERLAKELAQLK NDTKESIKAAFGPLLQVEVPDEIKKKIVSTLNDLLSKVDSAKTKDEVLSINVEDYLLPLWKEVYIYKIDSMPTSKVILKK GEEKRMYTKEEAKLIINRIGSLSELLEYNVEKVELVQVALVLSRENVVGGFIAPGDEVKVYAKNGTTFREIVPEGYVVTA LLSTDAGRITVSESQQQTTTASSTSSTSSQQISSTSYSPGDVTYQNSQQSQTQSSVTQTTSESLSSTYTYSVNLGEILKA IAAGKIKAPESVRAQLSNYGWEVLDLEQEFKFLALPEDTRLLVIIEVPSEFVPEILNWKDSIVVAKVSR >Mature_468_residues AEDIEAKIRRLRELGKIAESKEETPTPTPAKPPRRRFSRIGTLREKERRKRVIIGAVVLSVIIIAGVFAIYMYFENKAVR ELENAKNAKIAEVNACFKGELANDTVKFQLINKIMAAKSIEELEKINVNQICEQRKKELEEERIRAEQERLAKELAQLKN DTKESIKAAFGPLLQVEVPDEIKKKIVSTLNDLLSKVDSAKTKDEVLSINVEDYLLPLWKEVYIYKIDSMPTSKVILKKG EEKRMYTKEEAKLIINRIGSLSELLEYNVEKVELVQVALVLSRENVVGGFIAPGDEVKVYAKNGTTFREIVPEGYVVTAL LSTDAGRITVSESQQQTTTASSTSSTSSQQISSTSYSPGDVTYQNSQQSQTQSSVTQTTSESLSSTYTYSVNLGEILKAI AAGKIKAPESVRAQLSNYGWEVLDLEQEFKFLALPEDTRLLVIIEVPSEFVPEILNWKDSIVVAKVSR
Specific function: Unknown
COG id: COG1627
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52591; Mature: 52460
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDIEAKIRRLRELGKIAESKEETPTPTPAKPPRRRFSRIGTLREKERRKRVIIGAVVL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVIIIAGVFAIYMYFENKAVRELENAKNAKIAEVNACFKGELANDTVKFQLINKIMAAKS HHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHHHHHH IEELEKINVNQICEQRKKELEEERIRAEQERLAKELAQLKNDTKESIKAAFGPLLQVEVP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECC DEIKKKIVSTLNDLLSKVDSAKTKDEVLSINVEDYLLPLWKEVYIYKIDSMPTSKVILKK HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHEEEEEECCCCCHHHHHHC GEEKRMYTKEEAKLIINRIGSLSELLEYNVEKVELVQVALVLSRENVVGGFIAPGDEVKV CCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCEEE YAKNGTTFREIVPEGYVVTALLSTDAGRITVSESQQQTTTASSTSSTSSQQISSTSYSPG EECCCCCHHHHCCCCEEEEEEEECCCCEEEECCCCHHHHCCCCCCCCCHHHHHCCCCCCC DVTYQNSQQSQTQSSVTQTTSESLSSTYTYSVNLGEILKAIAAGKIKAPESVRAQLSNYG CCEECCCHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHCC WEVLDLEQEFKFLALPEDTRLLVIIEVPSEFVPEILNWKDSIVVAKVSR CEEEEHHHCCEEEECCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure AEDIEAKIRRLRELGKIAESKEETPTPTPAKPPRRRFSRIGTLREKERRKRVIIGAVVL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVIIIAGVFAIYMYFENKAVRELENAKNAKIAEVNACFKGELANDTVKFQLINKIMAAKS HHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHHHHHH IEELEKINVNQICEQRKKELEEERIRAEQERLAKELAQLKNDTKESIKAAFGPLLQVEVP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECC DEIKKKIVSTLNDLLSKVDSAKTKDEVLSINVEDYLLPLWKEVYIYKIDSMPTSKVILKK HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHEEEEEECCCCCHHHHHHC GEEKRMYTKEEAKLIINRIGSLSELLEYNVEKVELVQVALVLSRENVVGGFIAPGDEVKV CCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCEEE YAKNGTTFREIVPEGYVVTALLSTDAGRITVSESQQQTTTASSTSSTSSQQISSTSYSPG EECCCCCHHHHCCCCEEEEEEEECCCCEEEECCCCHHHHCCCCCCCCCHHHHHCCCCCCC DVTYQNSQQSQTQSSVTQTTSESLSSTYTYSVNLGEILKAIAAGKIKAPESVRAQLSNYG CCEECCCHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHCC WEVLDLEQEFKFLALPEDTRLLVIIEVPSEFVPEILNWKDSIVVAKVSR CEEEEHHHCCEEEECCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA