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The map label for this gene is 18977364

Identifier: 18977364

GI number: 18977364

Start: 947243

End: 948172

Strand: Reverse

Name: 18977364

Synonym: PF0992

Alternate gene names: NA

Gene position: 948172-947243 (Counterclockwise)

Preceding gene: 18977365

Following gene: 18977363

Centisome position: 49.69

GC content: 42.8

Gene sequence:

>930_bases
GTGGCTGAAGAGAGAAGAGCTGGTAGATCAACCACTGCATTTACTGATGCCCTGGAGAAAATTTTGCCCAGTAAATTCCT
CAAGCGCTATGATCTCTTTTTATATTCCGCAGGCATAGACTTTAGAGCCTCTGAATATCTTGTTATATCACTCTTTATCG
GGATAATCCTGGGAATAGTGATCTACATCTTCTCCTCTTCCATTCCTGGATTACTAGTGGGAATTTTGGCTGGTTTTGGA
GGATTTGGGTACTTCTACCCCTACATTAGAATCACAAGAAGGATTGAAGACATGGAAAAAGCTCTTCCAGATGCATTCTT
TTATTTAGCTGGATCTCTAAGAGCCGGTGTGTCATTCTCAGAGGCCTTAGAAGAATTAGCCTCAGCGAAATTTGGGGCCT
TGACCTTAGAGTTTAGAAGAACTGTTTCAGAGATCAAGAGAGGAAGGCCTACTGTTGAAGCATTAAGAGCCTTTGCCCTA
AGGAACAAGAGATCTCCAGTCATATACAGATCAACCATGATAATTATTGAGGCCTTAGAAAGAGGAGCTCCCATGGCCGA
TGTGCTTGTGGCAGTGGCAAATGACGTAAGAGAAATAATAAGAATCCAGAAAGAAAGGAAGGCATCTACTGGAATGCAGA
TGATGTTCTTCCTTGTTTCAAGTGGATTTGTTGGTCCTTTTATAGTAGCTGTAGTTTCGAACATCGCAAGAGGCATGATT
GGAAGTGGAATGGGCCTTTCTATTCCAGTATCTGAACTAACCCTTGTACTTTGGCTGTTTTCAATAGTCCAAGGATTCAT
TAGTGGAATTGGGATTGGAATTATAAGGGAGGGGAAGTTCTCAGCTGGAATTCGCTATGGAGTTCTGCTAGCAATTATGG
CGGGGGCAGTTTTCTGGGGAGGAACGAAGGTCAACATTGGAGGGTTGTAG

Upstream 100 bases:

>100_bases
ATTCCTGGGCTTGTGGCAATAATGTTATTCGCATTCCCAATGCTATCTTTGATAATGATAACAATGATTAAGAGAGCTGA
ACCCAGGTGAGGTGAGTAAC

Downstream 100 bases:

>100_bases
TTTCTATTATTTTATCTCCATAAACCGTTTAAATTCTCATTGCATTAGATATAGTGACGAATAAAAGGGGTGGATTTCCA
TGTCCGAGAAGATGGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial Type II Secretion System Protein F Domain; Type II Secretion System; Type II Secretion System Protein F GspF

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MAEERRAGRSTTAFTDALEKILPSKFLKRYDLFLYSAGIDFRASEYLVISLFIGIILGIVIYIFSSSIPGLLVGILAGFG
GFGYFYPYIRITRRIEDMEKALPDAFFYLAGSLRAGVSFSEALEELASAKFGALTLEFRRTVSEIKRGRPTVEALRAFAL
RNKRSPVIYRSTMIIIEALERGAPMADVLVAVANDVREIIRIQKERKASTGMQMMFFLVSSGFVGPFIVAVVSNIARGMI
GSGMGLSIPVSELTLVLWLFSIVQGFISGIGIGIIREGKFSAGIRYGVLLAIMAGAVFWGGTKVNIGGL

Sequences:

>Translated_309_residues
MAEERRAGRSTTAFTDALEKILPSKFLKRYDLFLYSAGIDFRASEYLVISLFIGIILGIVIYIFSSSIPGLLVGILAGFG
GFGYFYPYIRITRRIEDMEKALPDAFFYLAGSLRAGVSFSEALEELASAKFGALTLEFRRTVSEIKRGRPTVEALRAFAL
RNKRSPVIYRSTMIIIEALERGAPMADVLVAVANDVREIIRIQKERKASTGMQMMFFLVSSGFVGPFIVAVVSNIARGMI
GSGMGLSIPVSELTLVLWLFSIVQGFISGIGIGIIREGKFSAGIRYGVLLAIMAGAVFWGGTKVNIGGL
>Mature_308_residues
AEERRAGRSTTAFTDALEKILPSKFLKRYDLFLYSAGIDFRASEYLVISLFIGIILGIVIYIFSSSIPGLLVGILAGFGG
FGYFYPYIRITRRIEDMEKALPDAFFYLAGSLRAGVSFSEALEELASAKFGALTLEFRRTVSEIKRGRPTVEALRAFALR
NKRSPVIYRSTMIIIEALERGAPMADVLVAVANDVREIIRIQKERKASTGMQMMFFLVSSGFVGPFIVAVVSNIARGMIG
SGMGLSIPVSELTLVLWLFSIVQGFISGIGIGIIREGKFSAGIRYGVLLAIMAGAVFWGGTKVNIGGL

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33733; Mature: 33602

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEERRAGRSTTAFTDALEKILPSKFLKRYDLFLYSAGIDFRASEYLVISLFIGIILGIV
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH
IYIFSSSIPGLLVGILAGFGGFGYFYPYIRITRRIEDMEKALPDAFFYLAGSLRAGVSFS
HHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EALEELASAKFGALTLEFRRTVSEIKRGRPTVEALRAFALRNKRSPVIYRSTMIIIEALE
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
RGAPMADVLVAVANDVREIIRIQKERKASTGMQMMFFLVSSGFVGPFIVAVVSNIARGMI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GSGMGLSIPVSELTLVLWLFSIVQGFISGIGIGIIREGKFSAGIRYGVLLAIMAGAVFWG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHCCHHHHHHHHHHHHHHHCC
GTKVNIGGL
CCEEECCCC
>Mature Secondary Structure 
AEERRAGRSTTAFTDALEKILPSKFLKRYDLFLYSAGIDFRASEYLVISLFIGIILGIV
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH
IYIFSSSIPGLLVGILAGFGGFGYFYPYIRITRRIEDMEKALPDAFFYLAGSLRAGVSFS
HHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EALEELASAKFGALTLEFRRTVSEIKRGRPTVEALRAFALRNKRSPVIYRSTMIIIEALE
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
RGAPMADVLVAVANDVREIIRIQKERKASTGMQMMFFLVSSGFVGPFIVAVVSNIARGMI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GSGMGLSIPVSELTLVLWLFSIVQGFISGIGIGIIREGKFSAGIRYGVLLAIMAGAVFWG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHCCHHHHHHHHHHHHHHHCC
GTKVNIGGL
CCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA