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The map label for this gene is 18977350

Identifier: 18977350

GI number: 18977350

Start: 935205

End: 936191

Strand: Direct

Name: 18977350

Synonym: PF0978

Alternate gene names: NA

Gene position: 935205-936191 (Clockwise)

Preceding gene: 18977349

Following gene: 18977351

Centisome position: 49.01

GC content: 35.66

Gene sequence:

>987_bases
ATGAGGGTCCCACTTCTCATTCTCCTATTTCTTGTACTTACTTCTGGTTGCATAGCCCCCTCAACTCCTTCTTTCACCCA
AACACCTACTTGTTTAGAGCAAGAAAAGGATCTCAACAAAGCAATTAAATGCTACTTAGAGGATCCAAGAGAAATTAAAG
CCCTAACAAATTTATCCAAATCTCTTAAAGGTCCCAATGAAGAGTGGACAATATGGAATATCTTAAAGTGGGAAGAAGAA
AACCTCAAATATGATGACAACAAACCAACAAACTACATTCTTAGGCCAAGCGAATTCTTAGTAAAAAGAAAAGGGGTTTG
CACAGATTACACCGTTCTTACCCTTGGGCTTCTCTTAACTTTAAATTACTCCCAAGTTGGCTTTATGATAGTGCACTATG
CTGAAAGTACAACTCTCCATTCTACTGCAATTGCTAATGTTTCAGGAACTCTATTTGTTTTAGATCAGAAGCTTCCACCT
TTAGATTTAGGAAGTTATATTGTAGAGAGTGGAAAAGCCGGAAAACTCATAACACAGGGAGAGCTTTATTATGTGAGTAA
ATCTAACGGAAGTATTATCATTGAAGGACCAACAATTCTAGGAGCTAATGATTTCATTAGGCAGGACTATAAAATTGATG
AGCAAGAACTAAAAAGCATTGAAATTGCTCTAAAAACTATGATAGCGCAGAGAAGCAAGTTATCTCAAGTTTATGAACTT
AAATATTCACTTCCCAGGGGGTTTAAGGAGCGGAGAGCCTGGATACTTAAAATTCCCAGGTTTAGAGTTATCTATAATCC
TATTTTTAAGGAGCAATATTTGGAGACAATTATCTACCATATCTTAGAAGACGAAGAAATTAAAGAGCACATTAAAACTG
CAACAGGGTTTTACTTGGAAGTTACAACTGAACAAGAAGACTTAATAATCAAATTCTACTTAGCAAAACAATATATCTAT
AAGGGTCACAACAAAAATAGGGGATAA

Upstream 100 bases:

>100_bases
AGAGACGTCATGATAATTGCCTTTGTTCATGGTTTTATCTTAAGTTTAATAGTTCCAATTCTTACTCCAACCCTAGCATC
TCTAGCTGCGAGGGGATAAT

Downstream 100 bases:

>100_bases
AGAACTACTAGGCTTTATACAGGAGATGAAGTATGGAAGGATTCTCCCATTATTGAAGCAAATGGGACACTAGATGAACT
AACAAGCTTCCTTGGAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MRVPLLILLFLVLTSGCIAPSTPSFTQTPTCLEQEKDLNKAIKCYLEDPREIKALTNLSKSLKGPNEEWTIWNILKWEEE
NLKYDDNKPTNYILRPSEFLVKRKGVCTDYTVLTLGLLLTLNYSQVGFMIVHYAESTTLHSTAIANVSGTLFVLDQKLPP
LDLGSYIVESGKAGKLITQGELYYVSKSNGSIIIEGPTILGANDFIRQDYKIDEQELKSIEIALKTMIAQRSKLSQVYEL
KYSLPRGFKERRAWILKIPRFRVIYNPIFKEQYLETIIYHILEDEEIKEHIKTATGFYLEVTTEQEDLIIKFYLAKQYIY
KGHNKNRG

Sequences:

>Translated_328_residues
MRVPLLILLFLVLTSGCIAPSTPSFTQTPTCLEQEKDLNKAIKCYLEDPREIKALTNLSKSLKGPNEEWTIWNILKWEEE
NLKYDDNKPTNYILRPSEFLVKRKGVCTDYTVLTLGLLLTLNYSQVGFMIVHYAESTTLHSTAIANVSGTLFVLDQKLPP
LDLGSYIVESGKAGKLITQGELYYVSKSNGSIIIEGPTILGANDFIRQDYKIDEQELKSIEIALKTMIAQRSKLSQVYEL
KYSLPRGFKERRAWILKIPRFRVIYNPIFKEQYLETIIYHILEDEEIKEHIKTATGFYLEVTTEQEDLIIKFYLAKQYIY
KGHNKNRG
>Mature_328_residues
MRVPLLILLFLVLTSGCIAPSTPSFTQTPTCLEQEKDLNKAIKCYLEDPREIKALTNLSKSLKGPNEEWTIWNILKWEEE
NLKYDDNKPTNYILRPSEFLVKRKGVCTDYTVLTLGLLLTLNYSQVGFMIVHYAESTTLHSTAIANVSGTLFVLDQKLPP
LDLGSYIVESGKAGKLITQGELYYVSKSNGSIIIEGPTILGANDFIRQDYKIDEQELKSIEIALKTMIAQRSKLSQVYEL
KYSLPRGFKERRAWILKIPRFRVIYNPIFKEQYLETIIYHILEDEEIKEHIKTATGFYLEVTTEQEDLIIKFYLAKQYIY
KGHNKNRG

Specific function: Unknown

COG id: COG1800

COG function: function code R; Predicted transglutaminase-like proteases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0252 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y978_PYRFU (Q8U271)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_578707.1
- ProteinModelPortal:   Q8U271
- EnsemblBacteria:   EBPYRT00000005214
- GeneID:   1468843
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0978
- NMPDR:   fig|186497.1.peg.1014
- GeneTree:   EBGT00050000023445
- OMA:   GRIVMER
- ProtClustDB:   CLSK2747705
- InterPro:   IPR007562

Pfam domain/function: PF04473 DUF553

EC number: NA

Molecular weight: Translated: 37793; Mature: 37793

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbfa23a4)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPLLILLFLVLTSGCIAPSTPSFTQTPTCLEQEKDLNKAIKCYLEDPREIKALTNLSK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SLKGPNEEWTIWNILKWEEENLKYDDNKPTNYILRPSEFLVKRKGVCTDYTVLTLGLLLT
HHCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHH
LNYSQVGFMIVHYAESTTLHSTAIANVSGTLFVLDQKLPPLDLGSYIVESGKAGKLITQG
CCCCCEEEEEEEECCCCEEHHHEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEECC
ELYYVSKSNGSIIIEGPTILGANDFIRQDYKIDEQELKSIEIALKTMIAQRSKLSQVYEL
EEEEEECCCCEEEEECCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYSLPRGFKERRAWILKIPRFRVIYNPIFKEQYLETIIYHILEDEEIKEHIKTATGFYLE
HHHCCCCHHHHCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEE
VTTEQEDLIIKFYLAKQYIYKGHNKNRG
EECCCCCEEEEHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MRVPLLILLFLVLTSGCIAPSTPSFTQTPTCLEQEKDLNKAIKCYLEDPREIKALTNLSK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SLKGPNEEWTIWNILKWEEENLKYDDNKPTNYILRPSEFLVKRKGVCTDYTVLTLGLLLT
HHCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHH
LNYSQVGFMIVHYAESTTLHSTAIANVSGTLFVLDQKLPPLDLGSYIVESGKAGKLITQG
CCCCCEEEEEEEECCCCEEHHHEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEECC
ELYYVSKSNGSIIIEGPTILGANDFIRQDYKIDEQELKSIEIALKTMIAQRSKLSQVYEL
EEEEEECCCCEEEEECCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYSLPRGFKERRAWILKIPRFRVIYNPIFKEQYLETIIYHILEDEEIKEHIKTATGFYLE
HHHCCCCHHHHCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEE
VTTEQEDLIIKFYLAKQYIYKGHNKNRG
EECCCCCEEEEHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA