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The map label for this gene is asrB [H]

Identifier: 18977264

GI number: 18977264

Start: 864854

End: 865732

Strand: Direct

Name: asrB [H]

Synonym: PF0892

Alternate gene names: 18977264

Gene position: 864854-865732 (Clockwise)

Preceding gene: 18977263

Following gene: 18977265

Centisome position: 45.32

GC content: 46.99

Gene sequence:

>879_bases
ATGATGTTGCCAAAAGAGATTATGATGCCAAATGATAATCCGTATGCCCTTCATAGAGTCAAAGTTCTAAAGGTTTACTC
CTTGACGGAAACGGAAAAGCTTTTCCTCTTTAGATTTGAGGATCCCGAGTTGGCAGAGAAGTGGACGTTCAAACCTGGAC
AGTTTGTCCAGCTGACGATACCTGGAGTTGGAGAGGTTCCCATAAGTATATGCTCTTCTCCAATGAGGAAAGGATTCTTT
GAGCTCTGTATAAGAAAGGCAGGAAGGGTCACAACTGTTGTCCATAGACTAAAGCCTGGCGATACTGTTCTTGTGAGAGG
GCCTTACGGTAATGGATTCCCAGTGGATGAGTGGGAAGGAATGGATCTACTATTAATAGCTGCTGGCCTTGGAACTGCAC
CTCTTAGGAGCGTCTTTCTCTATGCAATGGACAACAGGTGGAAGTATGGAAACATTACCTTCATAAACACCGCACGTTAT
GGGAAGGATCTCCTCTTCTACAAGGAGCTGGAGGCAATGAAAGACCTAGCTGAGGCTGAAAACGTGAAAATCATCCAGAG
CGTCACTAGGGATCCAAACTGGCCGGGCCTAAAGGGTAGGCCACAGCAGTTCATCGTTGAGGCCAACACAAATCCAAAGA
ACACTGCAGTTGCAATCTGTGGGCCTCCTAGAATGTATAAGTCAGTGTTTGAGGCCCTCATCAACTACGGTTATCGCCCA
GAGAACATCTTCGTGACATTGGAGAGAAGAATGAAATGTGGAATCGGGAAGTGCGGCCACTGCAACGTCGGAACGAGCAC
GAGCTGGAAGTACATCTGTAAAGATGGACCAGTCTTCACGTACTTCGACATAGTTTCAACCCCAGGACTGCTGGACTGA

Upstream 100 bases:

>100_bases
GGATTTTAGGACTTGAGGAGAACAAATGTCCCCCAACGGTTAGTGAGGAGATTCCAAAGAGAGGATTTGCATATTCCTCT
AACATTAGAGGTGATGGAGT

Downstream 100 bases:

>100_bases
GGTGAGGAAAATGGGAAAAGTTAGGATTGGATTTTACGCATTAACCTCGTGCTACGGCTGTCAATTGCAGCTAGCTATGA
TGGACGAGTTATTACAACTT

Product: cytochrome-c3 hydrogenase subunit gamma

Products: Oxidized Ferredoxin; NADPH. [C]

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MMLPKEIMMPNDNPYALHRVKVLKVYSLTETEKLFLFRFEDPELAEKWTFKPGQFVQLTIPGVGEVPISICSSPMRKGFF
ELCIRKAGRVTTVVHRLKPGDTVLVRGPYGNGFPVDEWEGMDLLLIAAGLGTAPLRSVFLYAMDNRWKYGNITFINTARY
GKDLLFYKELEAMKDLAEAENVKIIQSVTRDPNWPGLKGRPQQFIVEANTNPKNTAVAICGPPRMYKSVFEALINYGYRP
ENIFVTLERRMKCGIGKCGHCNVGTSTSWKYICKDGPVFTYFDIVSTPGLLD

Sequences:

>Translated_292_residues
MMLPKEIMMPNDNPYALHRVKVLKVYSLTETEKLFLFRFEDPELAEKWTFKPGQFVQLTIPGVGEVPISICSSPMRKGFF
ELCIRKAGRVTTVVHRLKPGDTVLVRGPYGNGFPVDEWEGMDLLLIAAGLGTAPLRSVFLYAMDNRWKYGNITFINTARY
GKDLLFYKELEAMKDLAEAENVKIIQSVTRDPNWPGLKGRPQQFIVEANTNPKNTAVAICGPPRMYKSVFEALINYGYRP
ENIFVTLERRMKCGIGKCGHCNVGTSTSWKYICKDGPVFTYFDIVSTPGLLD
>Mature_292_residues
MMLPKEIMMPNDNPYALHRVKVLKVYSLTETEKLFLFRFEDPELAEKWTFKPGQFVQLTIPGVGEVPISICSSPMRKGFF
ELCIRKAGRVTTVVHRLKPGDTVLVRGPYGNGFPVDEWEGMDLLLIAAGLGTAPLRSVFLYAMDNRWKYGNITFINTARY
GKDLLFYKELEAMKDLAEAENVKIIQSVTRDPNWPGLKGRPQQFIVEANTNPKNTAVAICGPPRMYKSVFEALINYGYRP
ENIFVTLERRMKCGIGKCGHCNVGTSTSWKYICKDGPVFTYFDIVSTPGLLD

Specific function: This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938
- InterPro:   IPR014260 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: 1.18.1.2 [C]

Molecular weight: Translated: 33054; Mature: 33054

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLPKEIMMPNDNPYALHRVKVLKVYSLTETEKLFLFRFEDPELAEKWTFKPGQFVQLTI
CCCCCHHCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCHHHHCCCCCCCEEEEEC
PGVGEVPISICSSPMRKGFFELCIRKAGRVTTVVHRLKPGDTVLVRGPYGNGFPVDEWEG
CCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHCCCCCEEEEECCCCCCCCCCCCCC
MDLLLIAAGLGTAPLRSVFLYAMDNRWKYGNITFINTARYGKDLLFYKELEAMKDLAEAE
CEEEEEECCCCCHHHHHEEEEEECCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
NVKIIQSVTRDPNWPGLKGRPQQFIVEANTNPKNTAVAICGPPRMYKSVFEALINYGYRP
CHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC
ENIFVTLERRMKCGIGKCGHCNVGTSTSWKYICKDGPVFTYFDIVSTPGLLD
CEEEEEEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MMLPKEIMMPNDNPYALHRVKVLKVYSLTETEKLFLFRFEDPELAEKWTFKPGQFVQLTI
CCCCCHHCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEECCCCHHHHCCCCCCCEEEEEC
PGVGEVPISICSSPMRKGFFELCIRKAGRVTTVVHRLKPGDTVLVRGPYGNGFPVDEWEG
CCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHCCCCCEEEEECCCCCCCCCCCCCC
MDLLLIAAGLGTAPLRSVFLYAMDNRWKYGNITFINTARYGKDLLFYKELEAMKDLAEAE
CEEEEEECCCCCHHHHHEEEEEECCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
NVKIIQSVTRDPNWPGLKGRPQQFIVEANTNPKNTAVAICGPPRMYKSVFEALINYGYRP
CHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC
ENIFVTLERRMKCGIGKCGHCNVGTSTSWKYICKDGPVFTYFDIVSTPGLLD
CEEEEEEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD; Flavin [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced Ferredoxin; NADP(+) [C]

Specific reaction: Reduced Ferredoxin + NADP(+) = Oxidized Ferredoxin + NADPH. [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1704886; 11677609 [H]