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The map label for this gene is asnC [C]

Identifier: 18977236

GI number: 18977236

Start: 839232

End: 839720

Strand: Reverse

Name: asnC [C]

Synonym: PF0864

Alternate gene names: 18977236

Gene position: 839720-839232 (Counterclockwise)

Preceding gene: 18977237

Following gene: 18977235

Centisome position: 44.0

GC content: 36.4

Gene sequence:

>489_bases
ATGAGTGAAATTCACCTTGACGATTTAGATAGGAACATACTAAGGTTATTAAAAAAGGATGCAAGATTAACTATATCTGA
GCTAAGTGAACAACTGAAAAAGCCAGAATCAACAATTCACTTTAGAATTAAAAAATTACAGGAAAGGGGAGTAATTGAGA
GATATACGATAATCCTGGGAGAACAATTAAAACCTAAGCACTTGGCTTTAATAGTTCTTGAGGTTGGTAAGCCCGTAATT
GAAGATTTCCTCGAGAGATATATCTCCTACATAAGCTCAACACTCTCCGCCCTGCCAGGAGTTCTCTTCGTGGCAAAGAG
TGGTGAGGACAAGATAATAGCATTAGTTGGAAAAAACAACAAAGATGAGCTTGTAAAGTTCATAGAGGAAAACATAACAT
CAATTCCAAACTTAAAGCATATTCAAATATTCCCAATAACTGAGATCAAAAAGGGAGAGGACTTAACTGGTTTCCTTGCT
GAGGTGTAG

Upstream 100 bases:

>100_bases
TCCAAAGACAATAGACGACATGATAAGCTTTATAATTGGAAAAATTTTAGATATTTTGGGGATTCCTCACAATCTTTATC
CAAGATGGGGGGGTTGAAAA

Downstream 100 bases:

>100_bases
GCTATTATGGAAGTTGAAATAAAGTTTAAGATTAAGTTAGAGGATTTTCTGCACACTCTTAACACTTTCAATCCTGAATT
CGTAAGATATGAGGAGCAGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSEIHLDDLDRNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTIILGEQLKPKHLALIVLEVGKPVI
EDFLERYISYISSTLSALPGVLFVAKSGEDKIIALVGKNNKDELVKFIEENITSIPNLKHIQIFPITEIKKGEDLTGFLA
EV

Sequences:

>Translated_162_residues
MSEIHLDDLDRNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTIILGEQLKPKHLALIVLEVGKPVI
EDFLERYISYISSTLSALPGVLFVAKSGEDKIIALVGKNNKDELVKFIEENITSIPNLKHIQIFPITEIKKGEDLTGFLA
EV
>Mature_161_residues
SEIHLDDLDRNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTIILGEQLKPKHLALIVLEVGKPVIE
DFLERYISYISSTLSALPGVLFVAKSGEDKIIALVGKNNKDELVKFIEENITSIPNLKHIQIFPITEIKKGEDLTGFLAE
V

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REG4_PYRFU (Q8U2H1)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_578593.1
- PDB:   2IA0
- PDBsum:   2IA0
- ProteinModelPortal:   Q8U2H1
- SMR:   Q8U2H1
- EnsemblBacteria:   EBPYRT00000004253
- GeneID:   1468724
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0864
- NMPDR:   fig|186497.1.peg.895
- GeneTree:   EBGT00050000022216
- HOGENOM:   HBG727059
- OMA:   HFRIKKL
- ProtClustDB:   CLSK253259
- GO:   GO:0005622
- InterPro:   IPR001845
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00033
- SMART:   SM00344

Pfam domain/function: PF01022 HTH_5

EC number: NA

Molecular weight: Translated: 18457; Mature: 18326

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00519 HTH_ASNC_1; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIHLDDLDRNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTIILG
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHC
EQLKPKHLALIVLEVGKPVIEDFLERYISYISSTLSALPGVLFVAKSGEDKIIALVGKNN
CCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCC
KDELVKFIEENITSIPNLKHIQIFPITEIKKGEDLTGFLAEV
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
SEIHLDDLDRNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTIILG
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHC
EQLKPKHLALIVLEVGKPVIEDFLERYISYISSTLSALPGVLFVAKSGEDKIIALVGKNN
CCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCC
KDELVKFIEENITSIPNLKHIQIFPITEIKKGEDLTGFLAEV
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA