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The map label for this gene is ytcJ [H]

Identifier: 18977218

GI number: 18977218

Start: 819107

End: 820618

Strand: Direct

Name: ytcJ [H]

Synonym: PF0846

Alternate gene names: 18977218

Gene position: 819107-820618 (Clockwise)

Preceding gene: 18977216

Following gene: 18977221

Centisome position: 42.92

GC content: 44.38

Gene sequence:

>1512_bases
ATGGCTTCATTACCCATAAGCAACTTCTTCACGTTTAACCACCAGTCTACTCTATTCACGAAAGTTAAAAATTTCATGGG
TGTAAAACATATAGGTGATTGCATGAAGGCCCTCATAAATGGAACAATATACACATCCTTTTCCCCAGTGAAGAAGGTTT
CTGGATTAGTTATTTCAAACGAAAGAGTCCTTTATGCAGGGGACTCATCAACTGCTCTCAGAATTGCGGAATTGGCTGGA
GGAGAAATAATAGACTTGAAGGGAAAGTTCGTCATGCCAGCATTCTTTGATTCTCATCTCCATTTGGACGAGCTTGGAAT
GAGCTTGGAAATGGTAGATTTAAGGGGAGTTAAGTCAATGGAAGAGTTAGTTGAAAGGGTGAAGAAGGGAAGAGGAAGAA
TAATATTTGGGTTTGGCTGGGATCAAGATGAGCTTGGAAGATGGCCAACGAGAGAAGACCTAGATGTTATAGACAGGCCC
GTATTTCTCTACAGAAGGTGCTTTCATGTGGCGGTTATGAACTCAAAGATGATTGACCTCTTGAACTTGAAGCCATCCAA
AGATTTTGACGAATCAACTGGAATAGTTAGGGAGAGGGCCCTAGAAGAGAGTAGGAAGATAATAAACGAGAAAATACTGA
CTGTTAAGGATTACAAGCACTACATAGAGAGCGCTCAGGAGCACCTTCTTAGCTTGGGTGTTCACTCTGTAGGGTTCATG
AGCGTGGGAGAAAAGGCTCTAAAGGCGCTCTTTGAGCTCGAGAGGGAAGGAAGACTAAAGATGAACGTTTTTGCGTACCT
AAGCCCCGAGTTGCTGGATAAGCTTGAGGAGCTGAACCTGGGAAAATTCGAGGGAAGAAGGCTGAGAATATGGGGAGTTA
AGCTCTTCGTTGATGGCAGTTTAGGTGCTAGAACAGCATTGCTGAGTGAACCTTACACTGATAATCCAACAACTTCTGGA
GAGCTCGTAATGAATAAAGATGAAATAGTTGAGGTCATCGAGAGGGCTAAGCCTTTAGGGTTGGACGTTGCAGTCCATGC
TATAGGAGATAAAGCCGTTGATGTGGCACTGGATGCCTTTGAAGAGGCAGAATTTTCAGGAAGGATCGAACATGCTTCCT
TAGTTAGGGATGATCAGTTGGAGAGGATAAAGGAGCTAAAAGTCAGGATTTCAGCTCAGCCTCACTTCATAGTGAGCGAC
TGGTGGATAGTAAACAGGGTAGGGGAAGAGAGGGCAAAGTGGGCTTACAGACTGAAGACCCTCTCTAGCATTACCAAGCT
TGGGTTTAGCACAGACTCTCCAATAGAACCGGCTGATCCATGGGTAAGCATTGATGCGGCAGTGAATAGGTACGTTGTTG
ACCCAGGAGAAAGGGTTAGCAGAGAGGAGGCCCTGCATCTCTACACTCATGGTTCTGCCCAAGTTACCTTAGCTGAAGAT
TTAGGGAAGCTGGAGAGAGGGTTTAGGGCAGAATACATAATCTTAGACAGAGATCCCCTTAAAGAAAATTAA

Upstream 100 bases:

>100_bases
TTCTGGCTTCAATCTCGCTATAGTCTCTATAACCTCCGTAGAAGGAGTCCCAGGATAACCAGTAGCAAAAGAAACTCCAG
CCTCCAAAGCTCCGTAAGCT

Downstream 100 bases:

>100_bases
GCTGTGCCTCCATCTCGTCCCAACTTTAAACTTTATGTCCTTCACAGAATATCCAAGCTTGATTCCCCTCTCTTTTATGA
CATTGAGCAGTTTTTCCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MASLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAG
GEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRP
VFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFM
SVGEKALKALFELEREGRLKMNVFAYLSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSG
ELVMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSD
WWIVNRVGEERAKWAYRLKTLSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAED
LGKLERGFRAEYIILDRDPLKEN

Sequences:

>Translated_503_residues
MASLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAG
GEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRP
VFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFM
SVGEKALKALFELEREGRLKMNVFAYLSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSG
ELVMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSD
WWIVNRVGEERAKWAYRLKTLSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAED
LGKLERGFRAEYIILDRDPLKEN
>Mature_502_residues
ASLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGG
EIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPV
FLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMS
VGEKALKALFELEREGRLKMNVFAYLSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGE
LVMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDW
WIVNRVGEERAKWAYRLKTLSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAEDL
GKLERGFRAEYIILDRDPLKEN

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 56885; Mature: 56754

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS01137 TATD_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVISN
CCCCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHCCEEEECCCHHHHHCCEEEEC
ERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDLRGVKSM
CEEEEECCCCCEEEEEECCCCEEEEECCCEEEHHHHCCCCCHHHHCCEEEEEHHCCHHHH
EELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDL
HHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEE
LNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFM
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SVGEKALKALFELEREGRLKMNVFAYLSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGS
HHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC
LGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAF
CCCHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH
EEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDWWIVNRVGEERAKWAYRLKT
HHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCEEHHHHHHHHHHHHHHHH
LSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAED
HHHHHHHCCCCCCCCCCCCCCEEEECHHCEEEECCCHHCCHHCEEEEEECCCEEEEEHHH
LGKLERGFRAEYIILDRDPLKEN
HHHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ASLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVISN
CCCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHCCEEEECCCHHHHHCCEEEEC
ERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDLRGVKSM
CEEEEECCCCCEEEEEECCCCEEEEECCCEEEHHHHCCCCCHHHHCCEEEEEHHCCHHHH
EELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDL
HHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEE
LNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFM
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SVGEKALKALFELEREGRLKMNVFAYLSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGS
HHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC
LGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAF
CCCHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH
EEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDWWIVNRVGEERAKWAYRLKT
HHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCEEHHHHHHHHHHHHHHHH
LSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAED
HHHHHHHCCCCCCCCCCCCCCEEEECHHCEEEECCCHHCCHHCEEEEEECCCEEEEEHHH
LGKLERGFRAEYIILDRDPLKEN
HHHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]