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The map label for this gene is 18977215

Identifier: 18977215

GI number: 18977215

Start: 815721

End: 816518

Strand: Direct

Name: 18977215

Synonym: PF0843

Alternate gene names: NA

Gene position: 815721-816518 (Clockwise)

Preceding gene: 33359515

Following gene: 18977216

Centisome position: 42.75

GC content: 42.61

Gene sequence:

>798_bases
ATGAAAATTATTAATGTGAGGGCCAAAAGCATCTACACAAAAAGCAAAATTCCTGGGGTCGATTGGGTGGTAAATCAATA
CGTAGGTTGCCAATTTGCATGCAAATACTGCTACGCAAAGTTTATCTGCAAGTGGAAACCCTATGGAGAGTGGGGAGGCT
GGGTTGAGATAAAGGTAAATGCTCCTGAGCTTGCAAGGAAGAGAGTTTATGGAGAGGTTTTCATGTCCAGCATTTCTGAT
CCATATCAGCCAATAGAGAAGGAGCTAAAACTCACGAGAAGAACGCTCGAAGCAATGAATAAGAGGAACAAGCTCAGCGT
CCTAACGAAGTCTCCTCTAGTCATTAGAGATATAGATGTTTTCAAGATGTTTGAGAAGATAGAGGTCGGGCTAACAATAA
ACAGCTTTGAGGGGAGGGAAAAACGTCTAATAGAGCCATTTGCTCCGGTCCAAAGGGCAAGAGTAAACGCCCTAAAAACG
CTAAAAGACGAGGGAATAAAGAATTATGCATTCGTAAGCCCAATAATCCCAGGGATCACGGACGTTGAAGAAATAATTAG
GGAAACAAGGAGCTTTACTGACTACTACTTCTTTGAGATATTAAACCTAAAGGCGGCTGGCAGGGAGTTTAAGGAATTAC
TGATGGAGAATTTCCCCGAGAGCTACAAAATAATGGTCGATGAGGATAAATTCTGGCGCTTTATCAAAGATCTAATAGAC
CTCATAAAGCGCTCAAACATAAAGGCAGAGGGGGTAGAAGTTCACAGGAGAGGCTGGGAGTTCATTGAGGTGAGGTGA

Upstream 100 bases:

>100_bases
TGCATTAGGGAACTATCGGTCTAGTTAGCTGTTCGTTAGCAGTTCAGTGTTACATTTGGCCGTAACTTTCACTCCTCCCA
AATATAAGTGGTGATACCAC

Downstream 100 bases:

>100_bases
ATGAAAATTGCAAGGGTTAATGGGCTGTGGATTACTATTCCAAACGTTAGGTACTCCTTTTTCAACACTCCATACATAGG
GCATAGGATTGGAACAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKIINVRAKSIYTKSKIPGVDWVVNQYVGCQFACKYCYAKFICKWKPYGEWGGWVEIKVNAPELARKRVYGEVFMSSISD
PYQPIEKELKLTRRTLEAMNKRNKLSVLTKSPLVIRDIDVFKMFEKIEVGLTINSFEGREKRLIEPFAPVQRARVNALKT
LKDEGIKNYAFVSPIIPGITDVEEIIRETRSFTDYYFFEILNLKAAGREFKELLMENFPESYKIMVDEDKFWRFIKDLID
LIKRSNIKAEGVEVHRRGWEFIEVR

Sequences:

>Translated_265_residues
MKIINVRAKSIYTKSKIPGVDWVVNQYVGCQFACKYCYAKFICKWKPYGEWGGWVEIKVNAPELARKRVYGEVFMSSISD
PYQPIEKELKLTRRTLEAMNKRNKLSVLTKSPLVIRDIDVFKMFEKIEVGLTINSFEGREKRLIEPFAPVQRARVNALKT
LKDEGIKNYAFVSPIIPGITDVEEIIRETRSFTDYYFFEILNLKAAGREFKELLMENFPESYKIMVDEDKFWRFIKDLID
LIKRSNIKAEGVEVHRRGWEFIEVR
>Mature_265_residues
MKIINVRAKSIYTKSKIPGVDWVVNQYVGCQFACKYCYAKFICKWKPYGEWGGWVEIKVNAPELARKRVYGEVFMSSISD
PYQPIEKELKLTRRTLEAMNKRNKLSVLTKSPLVIRDIDVFKMFEKIEVGLTINSFEGREKRLIEPFAPVQRARVNALKT
LKDEGIKNYAFVSPIIPGITDVEEIIRETRSFTDYYFFEILNLKAAGREFKELLMENFPESYKIMVDEDKFWRFIKDLID
LIKRSNIKAEGVEVHRRGWEFIEVR

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 31206; Mature: 31206

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIINVRAKSIYTKSKIPGVDWVVNQYVGCQFACKYCYAKFICKWKPYGEWGGWVEIKVN
CCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
APELARKRVYGEVFMSSISDPYQPIEKELKLTRRTLEAMNKRNKLSVLTKSPLVIRDIDV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHH
FKMFEKIEVGLTINSFEGREKRLIEPFAPVQRARVNALKTLKDEGIKNYAFVSPIIPGIT
HHHHHHHHHCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
DVEEIIRETRSFTDYYFFEILNLKAAGREFKELLMENFPESYKIMVDEDKFWRFIKDLID
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH
LIKRSNIKAEGVEVHRRGWEFIEVR
HHHHCCCCCCCHHHHHCCCEEEEEC
>Mature Secondary Structure
MKIINVRAKSIYTKSKIPGVDWVVNQYVGCQFACKYCYAKFICKWKPYGEWGGWVEIKVN
CCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
APELARKRVYGEVFMSSISDPYQPIEKELKLTRRTLEAMNKRNKLSVLTKSPLVIRDIDV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHH
FKMFEKIEVGLTINSFEGREKRLIEPFAPVQRARVNALKTLKDEGIKNYAFVSPIIPGIT
HHHHHHHHHCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
DVEEIIRETRSFTDYYFFEILNLKAAGREFKELLMENFPESYKIMVDEDKFWRFIKDLID
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH
LIKRSNIKAEGVEVHRRGWEFIEVR
HHHHCCCCCCCHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]