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The map label for this gene is 18977130

Identifier: 18977130

GI number: 18977130

Start: 753118

End: 753390

Strand: Reverse

Name: 18977130

Synonym: PF0758

Alternate gene names: NA

Gene position: 753390-753118 (Counterclockwise)

Preceding gene: 18977133

Following gene: 18977129

Centisome position: 39.48

GC content: 43.59

Gene sequence:

>273_bases
ATGTTCAAAGATAGCGAATATGAGCGGTGGATTAAAGAGGCCAAGAGAACTTTAGAATCCGCTTATTCGGACTTAAAGGA
AGGATATTATGAATGGGCCAGTTTTAAGTCCCAACAGGCGGCAGAATTAGCTGTTAAGGCAGTTCTACGAGGATTAGGCC
TTGCCCCAGTAGGTCACTCCATAACAAGGCTACTGCGAGAACTAAAAGGAATGGGATTCAACGTTCCAAAAAGCTCCTAT
ACTACGCAATGGAGCTCGATAGGAACTATATAG

Upstream 100 bases:

>100_bases
TACTTAATCCGAGAACCACACAAAATATATACACAAGCGATGAGGAATATAAACAAAATGTTTAATTATTTTTAGTTAAA
TTTGCCTACCGGTAAGGGTT

Downstream 100 bases:

>100_bases
CACCAAGATATCCAGATGCATATCCAGAGGGAGCGCCATTTGAGTACTATTCCGAGGAAGTAGCCAGATACTGTCAGGAT
AACTGGGGCATCACCTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein; Hepn Domain Protein

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MFKDSEYERWIKEAKRTLESAYSDLKEGYYEWASFKSQQAAELAVKAVLRGLGLAPVGHSITRLLRELKGMGFNVPKSSY
TTQWSSIGTI

Sequences:

>Translated_90_residues
MFKDSEYERWIKEAKRTLESAYSDLKEGYYEWASFKSQQAAELAVKAVLRGLGLAPVGHSITRLLRELKGMGFNVPKSSY
TTQWSSIGTI
>Mature_90_residues
MFKDSEYERWIKEAKRTLESAYSDLKEGYYEWASFKSQQAAELAVKAVLRGLGLAPVGHSITRLLRELKGMGFNVPKSSY
TTQWSSIGTI

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10208; Mature: 10208

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKDSEYERWIKEAKRTLESAYSDLKEGYYEWASFKSQQAAELAVKAVLRGLGLAPVGHS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ITRLLRELKGMGFNVPKSSYTTQWSSIGTI
HHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MFKDSEYERWIKEAKRTLESAYSDLKEGYYEWASFKSQQAAELAVKAVLRGLGLAPVGHS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ITRLLRELKGMGFNVPKSSYTTQWSSIGTI
HHHHHHHHHCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA