| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977057
Identifier: 18977057
GI number: 18977057
Start: 693117
End: 694037
Strand: Reverse
Name: 18977057
Synonym: PF0685
Alternate gene names: NA
Gene position: 694037-693117 (Counterclockwise)
Preceding gene: 18977058
Following gene: 18977054
Centisome position: 36.37
GC content: 40.93
Gene sequence:
>921_bases ATGGTTGAGCTTAGCAATGTAGTTGACCAAATTCTCAACCTTGCAGAGAGTGAACCTGTGTATCGTTTTAACGAGGAAGC TACAAAGCAACACTTAGTTCTCCCAATTTTGAGTGCGCTAGGTTGGAACATCTTTAGCCCCGAAGTAATGCCTGAAGAGC GTGTTCGTGGCCCTTATAGATACTACAGAGTGGACTATTCCTTAAGAGTTAATGGCAAGGTAAAGGCATACCTCGAAGTG AAGAGCCTTGGAGTTAATGTTTTTGAAGATAAGGGAGCACTCCATCAGTTAGTAATGTACTGCACTACGGACGGAGTTGG GGTTGGATTACTTACAAATGGTATTCAGTGGGTCGTGTTGAAGGCCTATGAGAAAGATAAAAGCATAGAGGAGCGAGTTA TTCTCAAAATAGATTTGAGATTAAGGAAGGAAGTTGAACTAGAGAAGTTAAAGCTCTTGGCAAAAGAAATCTTTGAACGC GATGATTATATTACAATAATAGAAGAGAGGGCTAAGGAACTTATGAATAAAGAGCAAGAGAGAAGCGAAGTAGCAATTTT CACTGAGCATCCAGAAGAGGCAAAGCTTTTAGATGAGTTGACTCCAGAGGAGTTATCGGGTAGGCCAAAGAAACTTGAAC TCTACATCTATTATAAAGGCCAATGGCACAAATTGCCAGTAGAGAGAAATGCTTGGTCCATGTCCTTGTTCACTGCTGTA AAGTTTTTGTATGAGCATGGCTTTCAAGACCTCTACATTCCAAGCTATGTGGAGACTACATACGTGAGAAATCCCGCGTC CACTGATGTAATTGGCTCCTGGTACGTTTACAGGCCAGAAAATGGTGGTAAAGCGGTATCAAAACTTAAGGAGTTAGAAA AGAAGACTGGAGTTAAAATTGCCATTAAAGTTGTGAAATGA
Upstream 100 bases:
>100_bases GTTTAGATGTGTACGAGGTCAACATTGAGGATCCTTTTGAAGATTATGATCCCTCAGAATATTGGGAACTGATGGATTGG GAAGAGTGAGGGTGGTATTC
Downstream 100 bases:
>100_bases CTTTTCATTTTTCTCGGTCAATTTTAACTTTAATCAGCGTGTTTATGTAGATCAGGGCTATTGTGGTAAGGAAGAGCAAA ACAACGCTTCCCGTGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Restriction R Protein N Terminal Domain Protein
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MVELSNVVDQILNLAESEPVYRFNEEATKQHLVLPILSALGWNIFSPEVMPEERVRGPYRYYRVDYSLRVNGKVKAYLEV KSLGVNVFEDKGALHQLVMYCTTDGVGVGLLTNGIQWVVLKAYEKDKSIEERVILKIDLRLRKEVELEKLKLLAKEIFER DDYITIIEERAKELMNKEQERSEVAIFTEHPEEAKLLDELTPEELSGRPKKLELYIYYKGQWHKLPVERNAWSMSLFTAV KFLYEHGFQDLYIPSYVETTYVRNPASTDVIGSWYVYRPENGGKAVSKLKELEKKTGVKIAIKVVK
Sequences:
>Translated_306_residues MVELSNVVDQILNLAESEPVYRFNEEATKQHLVLPILSALGWNIFSPEVMPEERVRGPYRYYRVDYSLRVNGKVKAYLEV KSLGVNVFEDKGALHQLVMYCTTDGVGVGLLTNGIQWVVLKAYEKDKSIEERVILKIDLRLRKEVELEKLKLLAKEIFER DDYITIIEERAKELMNKEQERSEVAIFTEHPEEAKLLDELTPEELSGRPKKLELYIYYKGQWHKLPVERNAWSMSLFTAV KFLYEHGFQDLYIPSYVETTYVRNPASTDVIGSWYVYRPENGGKAVSKLKELEKKTGVKIAIKVVK >Mature_306_residues MVELSNVVDQILNLAESEPVYRFNEEATKQHLVLPILSALGWNIFSPEVMPEERVRGPYRYYRVDYSLRVNGKVKAYLEV KSLGVNVFEDKGALHQLVMYCTTDGVGVGLLTNGIQWVVLKAYEKDKSIEERVILKIDLRLRKEVELEKLKLLAKEIFER DDYITIIEERAKELMNKEQERSEVAIFTEHPEEAKLLDELTPEELSGRPKKLELYIYYKGQWHKLPVERNAWSMSLFTAV KFLYEHGFQDLYIPSYVETTYVRNPASTDVIGSWYVYRPENGGKAVSKLKELEKKTGVKIAIKVVK
Specific function: Unknown
COG id: COG2810
COG function: function code V; Predicted type IV restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35541; Mature: 35541
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELSNVVDQILNLAESEPVYRFNEEATKQHLVLPILSALGWNIFSPEVMPEERVRGPYR CCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEE YYRVDYSLRVNGKVKAYLEVKSLGVNVFEDKGALHQLVMYCTTDGVGVGLLTNGIQWVVL EEEEEEEEEECCEEEEEEEEEECCCEEECCCCHHHHHHHHHCCCCCEEHHHHCCEEEEEE KAYEKDKSIEERVILKIDLRLRKEVELEKLKLLAKEIFERDDYITIIEERAKELMNKEQE EEHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHC RSEVAIFTEHPEEAKLLDELTPEELSGRPKKLELYIYYKGQWHKLPVERNAWSMSLFTAV CCEEEEEECCCHHHHHHHHCCCHHHCCCCCEEEEEEEECCCEEECCCCCCCHHHHHHHHH KFLYEHGFQDLYIPSYVETTYVRNPASTDVIGSWYVYRPENGGKAVSKLKELEKKTGVKI HHHHHCCCCCEECCCHHHHHEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEE AIKVVK EEEEEC >Mature Secondary Structure MVELSNVVDQILNLAESEPVYRFNEEATKQHLVLPILSALGWNIFSPEVMPEERVRGPYR CCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEE YYRVDYSLRVNGKVKAYLEVKSLGVNVFEDKGALHQLVMYCTTDGVGVGLLTNGIQWVVL EEEEEEEEEECCEEEEEEEEEECCCEEECCCCHHHHHHHHHCCCCCEEHHHHCCEEEEEE KAYEKDKSIEERVILKIDLRLRKEVELEKLKLLAKEIFERDDYITIIEERAKELMNKEQE EEHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHC RSEVAIFTEHPEEAKLLDELTPEELSGRPKKLELYIYYKGQWHKLPVERNAWSMSLFTAV CCEEEEEECCCHHHHHHHHCCCHHHCCCCCEEEEEEEECCCEEECCCCCCCHHHHHHHHH KFLYEHGFQDLYIPSYVETTYVRNPASTDVIGSWYVYRPENGGKAVSKLKELEKKTGVKI HHHHHCCCCCEECCCHHHHHEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEE AIKVVK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA