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The map label for this gene is yjgF [C]

Identifier: 18977040

GI number: 18977040

Start: 678104

End: 678484

Strand: Reverse

Name: yjgF [C]

Synonym: PF0668

Alternate gene names: 18977040

Gene position: 678484-678104 (Counterclockwise)

Preceding gene: 18977042

Following gene: 18977039

Centisome position: 35.56

GC content: 39.37

Gene sequence:

>381_bases
ATGAAAGAGGTAATTTTTGCTGAAAATGCTCCAAAACCAATAGGCCCTTATAGCCAGGCAATTAAGGCCGGAAACTTCCT
CTTTATCGCAGGCCAAATCCCAATAGATCCAAAAACTGGAGAAATCGTAAAAGGAGACATAAAGGCTCAGACAAGGCAAG
TTTTAGAGAACATAAAAGCAATTTTAGAGGCAGCTGGTTACTCTCTTACCGATGTCGTTAAGGTTACAGTATATCTAAAA
GATATGAACGACTTTGCAAAGATGAACGAGGTTTATGCAGAATATTTTGGAGAATCTAAGCCTGCTAGAGCTGCAGTAGA
GGTTTCAAGACTGCCAAAAGATGTTCTCATTGAAATTGAGGCGATAGCATATAAGGAGTAG

Upstream 100 bases:

>100_bases
TAACTGACATGTGCCTAAATAAAGTACTGTGTCTTTATAAGCTTAATGCATTTCTAAACATTTATTATGTCTTCTCCCCT
ATTATCTCGTGGTGATCCCT

Downstream 100 bases:

>100_bases
GCTCAGGAAGCCGTCCACTCCTCACCAATCAGGTGCGGAAGGCATCATCATCGCCTTACCTCCCTTAGATTCCTTATGTT
TTTAATCTAATCTTGTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVYLK
DMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIEAIAYKE

Sequences:

>Translated_126_residues
MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVYLK
DMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIEAIAYKE
>Mature_126_residues
MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVYLK
DMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIEAIAYKE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=123, Percent_Identity=47.9674796747967, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI87082396, Length=129, Percent_Identity=55.0387596899225, Blast_Score=145, Evalue=1e-36,
Organism=Escherichia coli, GI87082213, Length=129, Percent_Identity=50.3875968992248, Blast_Score=137, Evalue=3e-34,
Organism=Escherichia coli, GI1787245, Length=123, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71982075, Length=122, Percent_Identity=49.1803278688525, Blast_Score=127, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI25148896, Length=122, Percent_Identity=49.1803278688525, Blast_Score=127, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982068, Length=122, Percent_Identity=49.1803278688525, Blast_Score=126, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322138, Length=114, Percent_Identity=46.4912280701754, Blast_Score=107, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6320899, Length=103, Percent_Identity=48.5436893203884, Blast_Score=102, Evalue=1e-23,
Organism=Drosophila melanogaster, GI19921376, Length=123, Percent_Identity=41.4634146341463, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13907; Mature: 13907

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKA
CCCEEECCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHH
ILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIE
HHHHCCCCHHHHHEEEHHEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHEEEEH
AIAYKE
EEEECC
>Mature Secondary Structure
MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKAQTRQVLENIKA
CCCEEECCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHH
ILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVLIEIE
HHHHCCCCHHHHHEEEHHEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHEEEEH
AIAYKE
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]