| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976993
Identifier: 18976993
GI number: 18976993
Start: 638636
End: 639406
Strand: Direct
Name: 18976993
Synonym: PF0621
Alternate gene names: NA
Gene position: 638636-639406 (Clockwise)
Preceding gene: 18976992
Following gene: 18976994
Centisome position: 33.47
GC content: 40.99
Gene sequence:
>771_bases ATGAAGAAGGCAATAATTTTGCTTTTACTCCTCTTATTACCAGTAGTCTCAGCTCAAAAGGTTAAAGTTGTTGTATACGA TGACGGATATTGTTTAGTTAAGATAGTGATGAATGTAACTCCTGGGAGATTTGTAATTCCCCTTCCAGTGTATGAATTCT CAGAATTAAGTGCCAAGCTTAATGAAAAAGAAGTGCCACTTTTTTTAGAGGATGGTGAGTTCGTTGTTTACCCAACCACC AATGGAACTCTCGAGGTGGAGTTTTTAACTCCGGAACTAACGTCAAAAGAGGGTAGAGTCTGGACTGTGCACCTTCCATT CAATTATTCTGCAGAGGTAATACTTCCAGAAGATTCAGTGATAGTCGGGTTGTCTGGAATACCACTCAGCATAAGCGAGA ATTCCATAAAGATGCCCCCTGGAGAACAGTATATAAACTACGTATTTCCTCACAAAGAGGAAGTCATTACGATAACTGAA ACTAACACCCAGGTTGTGACGGAAACAAATTGGGGAAGTGTCTTGTTGGCCTTTGTAGGTGGAGTTGCAATAGGAGCATC ACCAATTTTATTTAGTAAGAAAAAGCGCGTAAAGACCATAGCCACAGGCGAGATATCTATTGAGGAACTTTCCGAGAAAT TCAATCTTAATGAGGATGAGAAGAGCGTAATTCTATACCTCTCCGACAGAGGAGGAAGGGCAAAACAGGCCGAAATAAGG AATGATTTAGGGTTGCCAAGGACTACAGCTTGGAGGCTGCTAAAAGACTAG
Upstream 100 bases:
>100_bases CGTTAACATCTGCAAGAAAGAAGGTTGCCCAAATGCTAGTGGAGGGCAGAGAGCTCATAATCTTACCCCAAGGAAATGAA GTTATAAAGAGTGATGAAGA
Downstream 100 bases:
>100_bases AGAAGATGGGAATTGTGACGCTCGAAAAAGTAAATAATGAAACGTGGGCAAAGCTAAATTATAAAATAAAAGAAGAGTAG TTACTTCTTCTTTGTATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKKAIILLLLLLLPVVSAQKVKVVVYDDGYCLVKIVMNVTPGRFVIPLPVYEFSELSAKLNEKEVPLFLEDGEFVVYPTT NGTLEVEFLTPELTSKEGRVWTVHLPFNYSAEVILPEDSVIVGLSGIPLSISENSIKMPPGEQYINYVFPHKEEVITITE TNTQVVTETNWGSVLLAFVGGVAIGASPILFSKKKRVKTIATGEISIEELSEKFNLNEDEKSVILYLSDRGGRAKQAEIR NDLGLPRTTAWRLLKD
Sequences:
>Translated_256_residues MKKAIILLLLLLLPVVSAQKVKVVVYDDGYCLVKIVMNVTPGRFVIPLPVYEFSELSAKLNEKEVPLFLEDGEFVVYPTT NGTLEVEFLTPELTSKEGRVWTVHLPFNYSAEVILPEDSVIVGLSGIPLSISENSIKMPPGEQYINYVFPHKEEVITITE TNTQVVTETNWGSVLLAFVGGVAIGASPILFSKKKRVKTIATGEISIEELSEKFNLNEDEKSVILYLSDRGGRAKQAEIR NDLGLPRTTAWRLLKD >Mature_256_residues MKKAIILLLLLLLPVVSAQKVKVVVYDDGYCLVKIVMNVTPGRFVIPLPVYEFSELSAKLNEKEVPLFLEDGEFVVYPTT NGTLEVEFLTPELTSKEGRVWTVHLPFNYSAEVILPEDSVIVGLSGIPLSISENSIKMPPGEQYINYVFPHKEEVITITE TNTQVVTETNWGSVLLAFVGGVAIGASPILFSKKKRVKTIATGEISIEELSEKFNLNEDEKSVILYLSDRGGRAKQAEIR NDLGLPRTTAWRLLKD
Specific function: Unknown
COG id: COG2512
COG function: function code S; Uncharacterized membrane-associated protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28481; Mature: 28481
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAIILLLLLLLPVVSAQKVKVVVYDDGYCLVKIVMNVTPGRFVIPLPVYEFSELSAKL CCHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEECCHHHHHHHHHC NEKEVPLFLEDGEFVVYPTTNGTLEVEFLTPELTSKEGRVWTVHLPFNYSAEVILPEDSV CCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCE IVGLSGIPLSISENSIKMPPGEQYINYVFPHKEEVITITETNTQVVTETNWGSVLLAFVG EEEECCCEEEECCCCEECCCCHHHHEEECCCCCCEEEEEECCEEEEEECCCHHHHHHHHC GVAIGASPILFSKKKRVKTIATGEISIEELSEKFNLNEDEKSVILYLSDRGGRAKQAEIR CHHCCCCCEEECCCCCEEEEEECCEEHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH NDLGLPRTTAWRLLKD HHCCCCCHHHHHEECC >Mature Secondary Structure MKKAIILLLLLLLPVVSAQKVKVVVYDDGYCLVKIVMNVTPGRFVIPLPVYEFSELSAKL CCHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEECCHHHHHHHHHC NEKEVPLFLEDGEFVVYPTTNGTLEVEFLTPELTSKEGRVWTVHLPFNYSAEVILPEDSV CCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCE IVGLSGIPLSISENSIKMPPGEQYINYVFPHKEEVITITETNTQVVTETNWGSVLLAFVG EEEECCCEEEECCCCEECCCCHHHHEEECCCCCCEEEEEECCEEEEEECCCHHHHHHHHC GVAIGASPILFSKKKRVKTIATGEISIEELSEKFNLNEDEKSVILYLSDRGGRAKQAEIR CHHCCCCCEEECCCCCEEEEEECCEEHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHH NDLGLPRTTAWRLLKD HHCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA