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The map label for this gene is hycI [C]

Identifier: 18976989

GI number: 18976989

Start: 636827

End: 637303

Strand: Direct

Name: hycI [C]

Synonym: PF0617

Alternate gene names: 18976989

Gene position: 636827-637303 (Clockwise)

Preceding gene: 18976988

Following gene: 18976992

Centisome position: 33.37

GC content: 39.2

Gene sequence:

>477_bases
ATGGAAGAGCTGAGAGAAGCTCTAAAAAATGCTAAGAGAATTGTAATATGTGGAATAGGGAATGACATCAGGGGAGACGA
CAGCTTCGGGGTTTATATTGCAGAAAAATTAAAGAGAGTTATAAAGAAGGCAAACATTCTAGTCCTCAACTGTGGAGAGG
TTCCAGAGAACTACACAGGGAAGATACTAAACTTTCACCCTGATTTAATCATTTTTATAGACGCAGTAAACTTCGGAGGA
AAGCCTGGAGAAATAATAATTACAGATCCAGAAAATACTGAAGGGGCCGGAGTTTCCACCCACAGTCTTCCCCTCAAGTT
TTTGGCCACTTATCTCAAAGCTAATACAAATGCCAAGACAATCTTAATAGGATGCCAGCCAAAGAACATTGGGCTTTTTG
AAGATATGAGCGAAGAAGTAAAAGCCGTTGCGGAAGTCTTATTAAAATTCCTTTATGAAAGTCTTGAGCTTTCTTAG

Upstream 100 bases:

>100_bases
GGATCTAGAGAGTAAAGTTGGAAATGTTAATGAACTTTTAGCCACAGAGTTTGCCGAGAAAATTAGAGGAATAGCTAAAA
AGATTTGACTGGTGCAAGCT

Downstream 100 bases:

>100_bases
GTCCTCTTTCTTATTTATATTGAAGAACGCCCATTTCCACCTTTCTGGCAAAGATTCCACTGGAATGTAGCAAGGATTTG
AGCTTTCAATAACATTGCCA

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MEELREALKNAKRIVICGIGNDIRGDDSFGVYIAEKLKRVIKKANILVLNCGEVPENYTGKILNFHPDLIIFIDAVNFGG
KPGEIIITDPENTEGAGVSTHSLPLKFLATYLKANTNAKTILIGCQPKNIGLFEDMSEEVKAVAEVLLKFLYESLELS

Sequences:

>Translated_158_residues
MEELREALKNAKRIVICGIGNDIRGDDSFGVYIAEKLKRVIKKANILVLNCGEVPENYTGKILNFHPDLIIFIDAVNFGG
KPGEIIITDPENTEGAGVSTHSLPLKFLATYLKANTNAKTILIGCQPKNIGLFEDMSEEVKAVAEVLLKFLYESLELS
>Mature_158_residues
MEELREALKNAKRIVICGIGNDIRGDDSFGVYIAEKLKRVIKKANILVLNCGEVPENYTGKILNFHPDLIIFIDAVNFGG
KPGEIIITDPENTEGAGVSTHSLPLKFLATYLKANTNAKTILIGCQPKNIGLFEDMSEEVKAVAEVLLKFLYESLELS

Specific function: Protease Involved In The C-Terminal Processing Of Hyce, The Large Subunit Of Hydrogenase 3. [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1789072, Length=144, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004420
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 17380; Mature: 17380

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELREALKNAKRIVICGIGNDIRGDDSFGVYIAEKLKRVIKKANILVLNCGEVPENYTG
CHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
KILNFHPDLIIFIDAVNFGGKPGEIIITDPENTEGAGVSTHSLPLKFLATYLKANTNAKT
CEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE
ILIGCQPKNIGLFEDMSEEVKAVAEVLLKFLYESLELS
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEELREALKNAKRIVICGIGNDIRGDDSFGVYIAEKLKRVIKKANILVLNCGEVPENYTG
CHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
KILNFHPDLIIFIDAVNFGGKPGEIIITDPENTEGAGVSTHSLPLKFLATYLKANTNAKT
CEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE
ILIGCQPKNIGLFEDMSEEVKAVAEVLLKFLYESLELS
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Ni [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]