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The map label for this gene is cpsA1 [H]

Identifier: 18976969

GI number: 18976969

Start: 617713

End: 619035

Strand: Direct

Name: cpsA1 [H]

Synonym: PF0597

Alternate gene names: 18976969

Gene position: 617713-619035 (Clockwise)

Preceding gene: 33359487

Following gene: 33359489

Centisome position: 32.37

GC content: 45.88

Gene sequence:

>1323_bases
ATGACTCAAGAATATTGTAGGTTTTGTGGCGTATACAATCTTCCCGCTTGCAAAGTGATCTGTGTGAGCGTGACTCTGAA
AGGCAACTTTACCTTTCCAGTCAAATCCTACCACATCGAACTTCATCGAAATCCTAATATCTCCGACCAGGTAATATATC
CTTCGGTGGTCCAAATGTTCAACCCCCTTGAGGAGGCCATGAAGATTAAGGACGAAATCATCTCCTGGAGAAGAGACTTC
CACATGTACCCAGAACTAGGTTACGAAGAGGAGAGAACTTCCAGAATAGTTGAGGAACACCTAAAAGAGTGGGGGTATAA
GATAAAGAGAGTAGGAACGGGAATAATTGCTGACATTGGGAGTGGAGAAAAAACTGTGGCCTTAAGAGCAGATATGGATG
CTCTCCCAATTCAAGAGGAGAACGAAGTCCCATACAAATCTAGAGTTCCTGGGAAAATGCATGCTTGTGGTCATGATGCT
CACACCGCAATGCTTCTAGGAGCAGCGAAGATAATTGCGGAGCATGAAGAAGAGCTAAACAATAGGGTTAGGCTAATCTT
CCAGCCTGCTGAAGAAGGGGGCAATGGAGCACTAAAAATGATAGAAGGAGGAGCATTAGAGGATGTAGACGCTATTTTCG
GCCTTCACGTTTGGGCAGAGCTGGAGTCTGGTATAATTGGACTTAGAAAGGGCCCATTCCTTGCAGGTGTTGGAAAGTTC
AACGTGAAAATAATTGGGAAAGGAGGGCATGGGGCAGCTCCTCAATATGCAATAGACCCAGTTCCAGCGGTAGCGGAGGC
AATTTTAGCTCTCCAAAGGATAGTTGCCAGGGAGATTGACCCGCTAGAAAGTGCAGTGGTTACGGTAGGGAAAGTTCAGG
GTGGAACGGCTTTCAACGTAATTCCAGAAAGTGTGGAGTTTGAGGGGACTTTCAGGTTCTTCACGGAGGAACTTGGAGGG
TTCATAAGAAAGAGAATTTCTGAAATTGTAAGTGAGGTTGCAAAGGCTCACAGGTGTAGAGCTGAAGTCAAGACTGAAAT
TCTAGGCCCTCCCACAATAAACGATGACAGAATGGTTGAGTTCGTAAGGGAAGTTGCCCAGGGACTCGGGCTGAAAGTGG
GAGAAGTTAAGAAGACTTTAGGTGGAGAAGACTTTGCCTTCTATCTCCAGAGAGTACCTGGGGCATTTATAGCTTTAGGA
ATTAGAAATGAAAAGAAGGGGATAATCTACCCACACCACAACCCAAGGTTTGACGTCGATGAGGACATTCTTCCCCTGGG
AACTGCACTGGAAGTTGCCTTGGCCTTCAACTTTAGAGGTTAG

Upstream 100 bases:

>100_bases
AGCCGAGCATGTGGCCAGAAGGATAGAGTTTTGCCTTGTAATCTCCGATGTAGAACCTCTTTCCATATTCGACCTGGGAA
TATAGAGTGGAGTTCCTCAA

Downstream 100 bases:

>100_bases
CCAGTATCTCCTCTTCTTCCATTGTTCTTTCACAGTAGTGACACCTAACTTTCAATGGTTCCTTGCTGATCACGTAGAAC
TTTGGAGTTACATATTCGTA

Product: IAA-amino acid hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTQEYCRFCGVYNLPACKVICVSVTLKGNFTFPVKSYHIELHRNPNISDQVIYPSVVQMFNPLEEAMKIKDEIISWRRDF
HMYPELGYEEERTSRIVEEHLKEWGYKIKRVGTGIIADIGSGEKTVALRADMDALPIQEENEVPYKSRVPGKMHACGHDA
HTAMLLGAAKIIAEHEEELNNRVRLIFQPAEEGGNGALKMIEGGALEDVDAIFGLHVWAELESGIIGLRKGPFLAGVGKF
NVKIIGKGGHGAAPQYAIDPVPAVAEAILALQRIVAREIDPLESAVVTVGKVQGGTAFNVIPESVEFEGTFRFFTEELGG
FIRKRISEIVSEVAKAHRCRAEVKTEILGPPTINDDRMVEFVREVAQGLGLKVGEVKKTLGGEDFAFYLQRVPGAFIALG
IRNEKKGIIYPHHNPRFDVDEDILPLGTALEVALAFNFRG

Sequences:

>Translated_440_residues
MTQEYCRFCGVYNLPACKVICVSVTLKGNFTFPVKSYHIELHRNPNISDQVIYPSVVQMFNPLEEAMKIKDEIISWRRDF
HMYPELGYEEERTSRIVEEHLKEWGYKIKRVGTGIIADIGSGEKTVALRADMDALPIQEENEVPYKSRVPGKMHACGHDA
HTAMLLGAAKIIAEHEEELNNRVRLIFQPAEEGGNGALKMIEGGALEDVDAIFGLHVWAELESGIIGLRKGPFLAGVGKF
NVKIIGKGGHGAAPQYAIDPVPAVAEAILALQRIVAREIDPLESAVVTVGKVQGGTAFNVIPESVEFEGTFRFFTEELGG
FIRKRISEIVSEVAKAHRCRAEVKTEILGPPTINDDRMVEFVREVAQGLGLKVGEVKKTLGGEDFAFYLQRVPGAFIALG
IRNEKKGIIYPHHNPRFDVDEDILPLGTALEVALAFNFRG
>Mature_439_residues
TQEYCRFCGVYNLPACKVICVSVTLKGNFTFPVKSYHIELHRNPNISDQVIYPSVVQMFNPLEEAMKIKDEIISWRRDFH
MYPELGYEEERTSRIVEEHLKEWGYKIKRVGTGIIADIGSGEKTVALRADMDALPIQEENEVPYKSRVPGKMHACGHDAH
TAMLLGAAKIIAEHEEELNNRVRLIFQPAEEGGNGALKMIEGGALEDVDAIFGLHVWAELESGIIGLRKGPFLAGVGKFN
VKIIGKGGHGAAPQYAIDPVPAVAEAILALQRIVAREIDPLESAVVTVGKVQGGTAFNVIPESVEFEGTFRFFTEELGGF
IRKRISEIVSEVAKAHRCRAEVKTEILGPPTINDDRMVEFVREVAQGLGLKVGEVKKTLGGEDFAFYLQRVPGAFIALGI
RNEKKGIIYPHHNPRFDVDEDILPLGTALEVALAFNFRG

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=432, Percent_Identity=28.7037037037037, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 48704; Mature: 48573

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEYCRFCGVYNLPACKVICVSVTLKGNFTFPVKSYHIELHRNPNISDQVIYPSVVQMF
CCHHHHHHCCCCCCCCEEEEEEEEEEECCEEECEEEEEEEEECCCCCCCCEECHHHHHHH
NPLEEAMKIKDEIISWRRDFHMYPELGYEEERTSRIVEEHLKEWGYKIKRVGTGIIADIG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEHHCCCCEEEECC
SGEKTVALRADMDALPIQEENEVPYKSRVPGKMHACGHDAHTAMLLGAAKIIAEHEEELN
CCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NRVRLIFQPAEEGGNGALKMIEGGALEDVDAIFGLHVWAELESGIIGLRKGPFLAGVGKF
CEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCE
NVKIIGKGGHGAAPQYAIDPVPAVAEAILALQRIVAREIDPLESAVVTVGKVQGGTAFNV
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCEEEEE
IPESVEFEGTFRFFTEELGGFIRKRISEIVSEVAKAHRCRAEVKTEILGPPTINDDRMVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FVREVAQGLGLKVGEVKKTLGGEDFAFYLQRVPGAFIALGIRNEKKGIIYPHHNPRFDVD
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCCCC
EDILPLGTALEVALAFNFRG
CCCCCCCHHEEEEEEEECCC
>Mature Secondary Structure 
TQEYCRFCGVYNLPACKVICVSVTLKGNFTFPVKSYHIELHRNPNISDQVIYPSVVQMF
CHHHHHHCCCCCCCCEEEEEEEEEEECCEEECEEEEEEEEECCCCCCCCEECHHHHHHH
NPLEEAMKIKDEIISWRRDFHMYPELGYEEERTSRIVEEHLKEWGYKIKRVGTGIIADIG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEHHCCCCEEEECC
SGEKTVALRADMDALPIQEENEVPYKSRVPGKMHACGHDAHTAMLLGAAKIIAEHEEELN
CCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NRVRLIFQPAEEGGNGALKMIEGGALEDVDAIFGLHVWAELESGIIGLRKGPFLAGVGKF
CEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCE
NVKIIGKGGHGAAPQYAIDPVPAVAEAILALQRIVAREIDPLESAVVTVGKVQGGTAFNV
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCEEEEE
IPESVEFEGTFRFFTEELGGFIRKRISEIVSEVAKAHRCRAEVKTEILGPPTINDDRMVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FVREVAQGLGLKVGEVKKTLGGEDFAFYLQRVPGAFIALGIRNEKKGIIYPHHNPRFDVD
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCCCC
EDILPLGTALEVALAFNFRG
CCCCCCCHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]