Click here to switch to the map view.

The map label for this gene is yeaD [H]

Identifier: 18976890

GI number: 18976890

Start: 537725

End: 538948

Strand: Direct

Name: yeaD [H]

Synonym: PF0518

Alternate gene names: 18976890

Gene position: 537725-538948 (Clockwise)

Preceding gene: 18976889

Following gene: 18976891

Centisome position: 28.18

GC content: 40.28

Gene sequence:

>1224_bases
ATGAGGCCCAGCGGAAGGGCTTACAGCCTAGCAGTGGCCACCTGGGTAATAATATTTGCTTCTTATGCCTTTCTTAAATG
GACAGGCGTTTTCCTTACAATTCCGATTTTTACCCTAATAATGTTCTCTACCCTATTCTTTAAGCCAAATTTGGATGTCG
AAGTTAGGAGGATTGTGAGTCAAGAAAGAGTTATTGAAGGTGGAGAAGCTGAAATTGAAATTATTGTAAAAAGCAAAGAG
AGGATAAGGTCACTCTACATTGAAGACCTAACTCCCCCTTCTCTGGAAGTAATTGGAAAGAATTCCTGGGTTATTTCTCT
TGAGGAAGAAGATGAGAAAAAATTGAGGTATAAGGTTAAAGTTAGAAGAGGTATCCATGAGTTTCCTGGGATTAGAATTG
TTTATAGAGATCCTCTCGGCATCTTTGAAGAGGATAGAATCATTGAAGCTTACGATGAAGTGGTTGGTGTTCCCAGGCTT
GAAGATATAGTGACTCCATATTCTACTAAAGGAACGAAGATAACCACTGGGCCTCTTCCTTCTCCAAGAATAGGGGAAGG
ATTAGAGTTTCATGCAGTTAGAGAGTATCACCCTGGAGATCCAATTAAGATAATGAACTGGAAAGCAACAGCAAAGGTAG
GAAAGCTCATGGTAAATGAATTTGAAAGTGAAAGGAAGGTGGATGTTGTTTTGGTCATTGATGCAACTTACAAGGCTGGA
GAAGTTTTTGATCATATGATGAGAGCAGCGGCTTCTCTTCTGTTTGATTCCCTTAAGAACGGTACAAGTTTTGGGCTTTT
AATTTCGGAGTCAGTTCCACTTTGGATGAAGGTTGATTACGGAAAGCGGCACTTCTTTAAGTGCATAGATGTCTTAAGTA
TGGCAAGTCCCGACAAGAACAACTTGATAGCTTATCAAGTGGAGCATTTAGCTAGGACGAAAATCCCTCCCAGGGCTCAA
ATAATCTTCATTTCACCCTTCATGACAAAAGAGAGTGAAGATGCTCTCATAACTATGTATAGGTTTGGTTACAGAATTGT
TGCAATAAGTCCTGACCCGTATTCACTTATAAAGCCAAAGACAAGAGAAGAGGAGTTGGCCGTTAGGTTGCTCAGCTTGA
AGAGAAAAGCTCGGATTAGAAAGCTTAGGAGCTACGCTCCAATAATAGATTGGAATGTAAATGTTCCGCTAAAATCTGCT
GTTTTGGAGGTGGTAAAATGGTGA

Upstream 100 bases:

>100_bases
CTAAAGAGGGAGCTTTGGTACACTAGGGTAAGTCAAGAGAGCGTTATTATGAAGATACTCGAAAAAGTTCCTGTCCCCAA
GTTTGAGTAAGGGATGAAAC

Downstream 100 bases:

>100_bases
AAAGATTATTCTCAATATTATTGGCCCTTATGCTTGGATTAATTCTGTATACATTACCAAGTGGGAAACTTCTGATTCCT
CTCTTAATTCTTCCGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRPSGRAYSLAVATWVIIFASYAFLKWTGVFLTIPIFTLIMFSTLFFKPNLDVEVRRIVSQERVIEGGEAEIEIIVKSKE
RIRSLYIEDLTPPSLEVIGKNSWVISLEEEDEKKLRYKVKVRRGIHEFPGIRIVYRDPLGIFEEDRIIEAYDEVVGVPRL
EDIVTPYSTKGTKITTGPLPSPRIGEGLEFHAVREYHPGDPIKIMNWKATAKVGKLMVNEFESERKVDVVLVIDATYKAG
EVFDHMMRAAASLLFDSLKNGTSFGLLISESVPLWMKVDYGKRHFFKCIDVLSMASPDKNNLIAYQVEHLARTKIPPRAQ
IIFISPFMTKESEDALITMYRFGYRIVAISPDPYSLIKPKTREEELAVRLLSLKRKARIRKLRSYAPIIDWNVNVPLKSA
VLEVVKW

Sequences:

>Translated_407_residues
MRPSGRAYSLAVATWVIIFASYAFLKWTGVFLTIPIFTLIMFSTLFFKPNLDVEVRRIVSQERVIEGGEAEIEIIVKSKE
RIRSLYIEDLTPPSLEVIGKNSWVISLEEEDEKKLRYKVKVRRGIHEFPGIRIVYRDPLGIFEEDRIIEAYDEVVGVPRL
EDIVTPYSTKGTKITTGPLPSPRIGEGLEFHAVREYHPGDPIKIMNWKATAKVGKLMVNEFESERKVDVVLVIDATYKAG
EVFDHMMRAAASLLFDSLKNGTSFGLLISESVPLWMKVDYGKRHFFKCIDVLSMASPDKNNLIAYQVEHLARTKIPPRAQ
IIFISPFMTKESEDALITMYRFGYRIVAISPDPYSLIKPKTREEELAVRLLSLKRKARIRKLRSYAPIIDWNVNVPLKSA
VLEVVKW
>Mature_407_residues
MRPSGRAYSLAVATWVIIFASYAFLKWTGVFLTIPIFTLIMFSTLFFKPNLDVEVRRIVSQERVIEGGEAEIEIIVKSKE
RIRSLYIEDLTPPSLEVIGKNSWVISLEEEDEKKLRYKVKVRRGIHEFPGIRIVYRDPLGIFEEDRIIEAYDEVVGVPRL
EDIVTPYSTKGTKITTGPLPSPRIGEGLEFHAVREYHPGDPIKIMNWKATAKVGKLMVNEFESERKVDVVLVIDATYKAG
EVFDHMMRAAASLLFDSLKNGTSFGLLISESVPLWMKVDYGKRHFFKCIDVLSMASPDKNNLIAYQVEHLARTKIPPRAQ
IIFISPFMTKESEDALITMYRFGYRIVAISPDPYSLIKPKTREEELAVRLLSLKRKARIRKLRSYAPIIDWNVNVPLKSA
VLEVVKW

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 46655; Mature: 46655

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSGRAYSLAVATWVIIFASYAFLKWTGVFLTIPIFTLIMFSTLFFKPNLDVEVRRIVS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QERVIEGGEAEIEIIVKSKERIRSLYIEDLTPPSLEVIGKNSWVISLEEEDEKKLRYKVK
HHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCHHHHHHHH
VRRGIHEFPGIRIVYRDPLGIFEEDRIIEAYDEVVGVPRLEDIVTPYSTKGTKITTGPLP
HHHCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCC
SPRIGEGLEFHAVREYHPGDPIKIMNWKATAKVGKLMVNEFESERKVDVVLVIDATYKAG
CCCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH
EVFDHMMRAAASLLFDSLKNGTSFGLLISESVPLWMKVDYGKRHFFKCIDVLSMASPDKN
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
NLIAYQVEHLARTKIPPRAQIIFISPFMTKESEDALITMYRFGYRIVAISPDPYSLIKPK
CEEEEEEHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCHHHCCCC
TREEELAVRLLSLKRKARIRKLRSYAPIIDWNVNVPLKSAVLEVVKW
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRPSGRAYSLAVATWVIIFASYAFLKWTGVFLTIPIFTLIMFSTLFFKPNLDVEVRRIVS
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QERVIEGGEAEIEIIVKSKERIRSLYIEDLTPPSLEVIGKNSWVISLEEEDEKKLRYKVK
HHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCHHHHHHHH
VRRGIHEFPGIRIVYRDPLGIFEEDRIIEAYDEVVGVPRLEDIVTPYSTKGTKITTGPLP
HHHCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCC
SPRIGEGLEFHAVREYHPGDPIKIMNWKATAKVGKLMVNEFESERKVDVVLVIDATYKAG
CCCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH
EVFDHMMRAAASLLFDSLKNGTSFGLLISESVPLWMKVDYGKRHFFKCIDVLSMASPDKN
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
NLIAYQVEHLARTKIPPRAQIIFISPFMTKESEDALITMYRFGYRIVAISPDPYSLIKPK
CEEEEEEHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCHHHCCCC
TREEELAVRLLSLKRKARIRKLRSYAPIIDWNVNVPLKSAVLEVVKW
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]