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The map label for this gene is yaaJ [C]

Identifier: 18976886

GI number: 18976886

Start: 533881

End: 535524

Strand: Reverse

Name: yaaJ [C]

Synonym: PF0514

Alternate gene names: 18976886

Gene position: 535524-533881 (Counterclockwise)

Preceding gene: 18976892

Following gene: 18976885

Centisome position: 28.06

GC content: 41.91

Gene sequence:

>1644_bases
ATGTTCTTAAGTGAACAAGTTCTCATTATAAAGACTTATATATGTCATCTTACACTATTTTATTTCGATAAACTACTGGG
AGGTGCATTGATGGGCGCAATTATGGACTTTATAAATTGGCTTGATGGAGAAGTCTGGGGACCGCCAATAATAGTGCTCC
TACTAGGTACCGGTCTTCTATTGACAATAGTCCTCAAGGCAATACAGTTCAGAAGGCTAGGGTGGTCAATTAGATTTACA
CTCTTCGAGGGAAGAAAGAAAACGGGTGAAGGAGACATAACACCTTTTCAAGCACTAATGGCAACTATTTCAGGAACCGT
TGGAATTGGTAACATAGCAGGTGTTGCAACAGCAATACACTTTGGTGGACCTGGAGCTTTGTTCTGGATGTGGATTACAG
CCCTTGTCGGTATGGCAACTAGATACTCAGAAGGACTTTTAGGAGTGGCATTTAGAGGAAAGCTACCAGATGGGACGATG
ATAGGAGGAACATTCAACTTCTTAGAAAGAGGATTTTCAGAAGTAAAAGGAACAGGTATAAGTAGGGCTATTGCTTCGAT
ATTCACATTGCTATTTGCAGTGTTCTTGATAAAGGATGGTTTAGGACTGACAGGAGGACTAAGAATTGTAGCCTTCATAA
TTGGAATCCTCTTTGCAATTCTAGGGCTAGCATTACTCAATGAAGCCTACCTCCCAACCATAGGAAAAGTACTCGCGGTA
CTATTCGCTTTATTCGCTGCAATTGCCGCATTCGGTATCGGAAACATGACCCAGTCAAATTCGGTTGCAGATGCTATTGA
GACAGCCTTTGGGATTCCAGCATGGGTTACAGGATTGGCATTAGCTGTTCTAACGTTCATAGTAGTCATTGGAGGTATAA
AGAGAATTGGAGAAGTTGCAGAAATGTTGGTACCATTTATGGCAATCGTGTACTTCCTCTTTGCGATAGGAGTTTGGATA
AAGTTTGCAGGACAGATACCTTCTGCAATTGCCACCATAATAAAGGACGCATTTACAGGAAAAGCAGTTGCTGGAGGAGC
AATTGGGCAGGTAATAATATGGGGTGTAAAGAGAGGATTGTTCTCAAATGAGGCTGGACTTGGTACAGCAACCTTGGCTC
ACGCTGCAGCAAAAACTGATCATCCCGCAAGGCAAGCTCACGTTGCAATGTTGGGACCCTTCATTGACACAATAATAATC
TGTTCATTGACTGGAATAAGCATTGTAGTCACCCAAGCATACACCAAGTATCCCGACCTTAACGGTGCTCCATTGACCCA
GGCTGCCTTTGCAGAGGCATTTGGTCATTTAGGAGAAATCATGGTTGCAATTGGAATAGTTCTCTTTGCATATTCAACAA
TACTAGCATGGTCATTCTATGGAAGACAGAATGTCATGTATTTGGCCAAGTGGATTACCCAAGACCCAGAGAAATTCGCA
AACCTCTATCCAAAATTACACTTAATCTACAACCTCCTCTTCGTTATCTTCATATACATCGGAGCTGTTAAGCCATTAGA
AGATGTATGGAACTTCTCAGACATGATGAACGGACTGATGGCAATTCCGAACCTAATAGGGCTGATAATTCTCTATCCAG
TGATCAAACAATACACTGAAGACTTTATCTCGAAGAATCCATAG

Upstream 100 bases:

>100_bases
CAATATGCCCATTACCACTAGAATGGCAAAAAATACTATCAAAGATTTTTTCATCGAGCTCTATTGGTAGTTCAAAATAA
AAAACCTTGTGTGCTCATAT

Downstream 100 bases:

>100_bases
AGACTTTTAGTTTTTCTCTTTGTTATCATTCCTATTTTTTGTCATGGGGGGAACTATAATGGAATATCCAAAGATTATTA
CTAAACTTCCTGGACCAAAA

Product: d-alanine glycine permease

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MFLSEQVLIIKTYICHLTLFYFDKLLGGALMGAIMDFINWLDGEVWGPPIIVLLLGTGLLLTIVLKAIQFRRLGWSIRFT
LFEGRKKTGEGDITPFQALMATISGTVGIGNIAGVATAIHFGGPGALFWMWITALVGMATRYSEGLLGVAFRGKLPDGTM
IGGTFNFLERGFSEVKGTGISRAIASIFTLLFAVFLIKDGLGLTGGLRIVAFIIGILFAILGLALLNEAYLPTIGKVLAV
LFALFAAIAAFGIGNMTQSNSVADAIETAFGIPAWVTGLALAVLTFIVVIGGIKRIGEVAEMLVPFMAIVYFLFAIGVWI
KFAGQIPSAIATIIKDAFTGKAVAGGAIGQVIIWGVKRGLFSNEAGLGTATLAHAAAKTDHPARQAHVAMLGPFIDTIII
CSLTGISIVVTQAYTKYPDLNGAPLTQAAFAEAFGHLGEIMVAIGIVLFAYSTILAWSFYGRQNVMYLAKWITQDPEKFA
NLYPKLHLIYNLLFVIFIYIGAVKPLEDVWNFSDMMNGLMAIPNLIGLIILYPVIKQYTEDFISKNP

Sequences:

>Translated_547_residues
MFLSEQVLIIKTYICHLTLFYFDKLLGGALMGAIMDFINWLDGEVWGPPIIVLLLGTGLLLTIVLKAIQFRRLGWSIRFT
LFEGRKKTGEGDITPFQALMATISGTVGIGNIAGVATAIHFGGPGALFWMWITALVGMATRYSEGLLGVAFRGKLPDGTM
IGGTFNFLERGFSEVKGTGISRAIASIFTLLFAVFLIKDGLGLTGGLRIVAFIIGILFAILGLALLNEAYLPTIGKVLAV
LFALFAAIAAFGIGNMTQSNSVADAIETAFGIPAWVTGLALAVLTFIVVIGGIKRIGEVAEMLVPFMAIVYFLFAIGVWI
KFAGQIPSAIATIIKDAFTGKAVAGGAIGQVIIWGVKRGLFSNEAGLGTATLAHAAAKTDHPARQAHVAMLGPFIDTIII
CSLTGISIVVTQAYTKYPDLNGAPLTQAAFAEAFGHLGEIMVAIGIVLFAYSTILAWSFYGRQNVMYLAKWITQDPEKFA
NLYPKLHLIYNLLFVIFIYIGAVKPLEDVWNFSDMMNGLMAIPNLIGLIILYPVIKQYTEDFISKNP
>Mature_547_residues
MFLSEQVLIIKTYICHLTLFYFDKLLGGALMGAIMDFINWLDGEVWGPPIIVLLLGTGLLLTIVLKAIQFRRLGWSIRFT
LFEGRKKTGEGDITPFQALMATISGTVGIGNIAGVATAIHFGGPGALFWMWITALVGMATRYSEGLLGVAFRGKLPDGTM
IGGTFNFLERGFSEVKGTGISRAIASIFTLLFAVFLIKDGLGLTGGLRIVAFIIGILFAILGLALLNEAYLPTIGKVLAV
LFALFAAIAAFGIGNMTQSNSVADAIETAFGIPAWVTGLALAVLTFIVVIGGIKRIGEVAEMLVPFMAIVYFLFAIGVWI
KFAGQIPSAIATIIKDAFTGKAVAGGAIGQVIIWGVKRGLFSNEAGLGTATLAHAAAKTDHPARQAHVAMLGPFIDTIII
CSLTGISIVVTQAYTKYPDLNGAPLTQAAFAEAFGHLGEIMVAIGIVLFAYSTILAWSFYGRQNVMYLAKWITQDPEKFA
NLYPKLHLIYNLLFVIFIYIGAVKPLEDVWNFSDMMNGLMAIPNLIGLIILYPVIKQYTEDFISKNP

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=522, Percent_Identity=30.6513409961686, Blast_Score=199, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 58861; Mature: 58861

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSEQVLIIKTYICHLTLFYFDKLLGGALMGAIMDFINWLDGEVWGPPIIVLLLGTGLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LTIVLKAIQFRRLGWSIRFTLFEGRKKTGEGDITPFQALMATISGTVGIGNIAGVATAIH
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
FGGPGALFWMWITALVGMATRYSEGLLGVAFRGKLPDGTMIGGTFNFLERGFSEVKGTGI
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHCCCCH
SRAIASIFTLLFAVFLIKDGLGLTGGLRIVAFIIGILFAILGLALLNEAYLPTIGKVLAV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFALFAAIAAFGIGNMTQSNSVADAIETAFGIPAWVTGLALAVLTFIVVIGGIKRIGEVA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMLVPFMAIVYFLFAIGVWIKFAGQIPSAIATIIKDAFTGKAVAGGAIGQVIIWGVKRGL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCC
FSNEAGLGTATLAHAAAKTDHPARQAHVAMLGPFIDTIIICSLTGISIVVTQAYTKYPDL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
NGAPLTQAAFAEAFGHLGEIMVAIGIVLFAYSTILAWSFYGRQNVMYLAKWITQDPEKFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
NLYPKLHLIYNLLFVIFIYIGAVKPLEDVWNFSDMMNGLMAIPNLIGLIILYPVIKQYTE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFISKNP
HHHCCCC
>Mature Secondary Structure
MFLSEQVLIIKTYICHLTLFYFDKLLGGALMGAIMDFINWLDGEVWGPPIIVLLLGTGLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LTIVLKAIQFRRLGWSIRFTLFEGRKKTGEGDITPFQALMATISGTVGIGNIAGVATAIH
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
FGGPGALFWMWITALVGMATRYSEGLLGVAFRGKLPDGTMIGGTFNFLERGFSEVKGTGI
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHCCCCH
SRAIASIFTLLFAVFLIKDGLGLTGGLRIVAFIIGILFAILGLALLNEAYLPTIGKVLAV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFALFAAIAAFGIGNMTQSNSVADAIETAFGIPAWVTGLALAVLTFIVVIGGIKRIGEVA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMLVPFMAIVYFLFAIGVWIKFAGQIPSAIATIIKDAFTGKAVAGGAIGQVIIWGVKRGL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCC
FSNEAGLGTATLAHAAAKTDHPARQAHVAMLGPFIDTIIICSLTGISIVVTQAYTKYPDL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
NGAPLTQAAFAEAFGHLGEIMVAIGIVLFAYSTILAWSFYGRQNVMYLAKWITQDPEKFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
NLYPKLHLIYNLLFVIFIYIGAVKPLEDVWNFSDMMNGLMAIPNLIGLIILYPVIKQYTE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFISKNP
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]