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The map label for this gene is 18976868

Identifier: 18976868

GI number: 18976868

Start: 517689

End: 518483

Strand: Direct

Name: 18976868

Synonym: PF0496

Alternate gene names: NA

Gene position: 517689-518483 (Clockwise)

Preceding gene: 18976867

Following gene: 18976878

Centisome position: 27.13

GC content: 41.64

Gene sequence:

>795_bases
ATGAGCAAAGATAGAATGGTAGAACTATTACAAGAACACTTTGAGTTGAACTTATACGAGGCTAGAGCATATGTTGCCTT
AGTAGCGTTTGGTGTTCTTACTCCAGCAGAATTAGCAAGTGTTTCGGAAGTTCCAGCGCCAAGAACTTACGATGTACTTA
GGAGTTTAGAAAAGAAAGGATTTGCCATGACTCAACCAGGAAAGACAAACAAGTACAGGCCAGTTCACCCAGCAAACGTT
CTTGAAAAGTTCATCCAGGACTGGCAAGAGAGGGTTAAGGAAGAACTTGAGGCTAAGAAGAAAGCTAAGGAGGAACTCCT
TGAATTAATGGCCCCACTAATAGAGACAGAGGTTCCAAAGTACGGAGTTGAGAGAGTTTGGGTGGTTAGAGGAATTAAGA
ACTCAACATTAAAGACCAAAGAAATGCTGGAAGAAGCTCAAAATGAAATACTATTGGCAGACGATGGATTCATAGCAGTT
AACCTTGAAGATGACATAATAAAGGCAGTTGACAGAGGAGTTAAGACAAAGATCCTTCTAACAAAGAACTTACTTCCAAG
GCTAAAGGCCTCCAAGATCATTGACTATGCAAAAGAGGGTAAGCTCGAGCTGAGGGCACTTGATAAGTTTGATCTTCCAA
TGCTGATCTGTGATGAAGAGGTATTCTTTGCACTGGAGGACTTGGCAGCTAGATACTTCAACTATGAGACCCAGGTTTGG
ATTAAGGATCACAGAGTTGTAGCTCTCTTCAAAGAGAAGTTCAACGAATACTGGGAGAAGGCTGAGAAGGTTTGA

Upstream 100 bases:

>100_bases
ATAAAAATATAAGAAGTATGTGATTTTCCTCCATGTAAAAGAAAAGCTTATATAATCTTACGCCATATAACAAATTGACA
AGTTTGTGGTGGTGGTAAGG

Downstream 100 bases:

>100_bases
TGTTCTATTTTCTATTTTTTAAGTTTTCAGAAAAGGTATGCTTCAAGAGTAATAAAACCCTCACTGATAAGCTCACCTCA
TAATAGGAAGTTAGAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Regulator Helix-Turn-Helix Family; TrmB Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator TrmB; Transcription Regulator TrmB-Like Protein

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRSLEKKGFAMTQPGKTNKYRPVHPANV
LEKFIQDWQERVKEELEAKKKAKEELLELMAPLIETEVPKYGVERVWVVRGIKNSTLKTKEMLEEAQNEILLADDGFIAV
NLEDDIIKAVDRGVKTKILLTKNLLPRLKASKIIDYAKEGKLELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVW
IKDHRVVALFKEKFNEYWEKAEKV

Sequences:

>Translated_264_residues
MSKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRSLEKKGFAMTQPGKTNKYRPVHPANV
LEKFIQDWQERVKEELEAKKKAKEELLELMAPLIETEVPKYGVERVWVVRGIKNSTLKTKEMLEEAQNEILLADDGFIAV
NLEDDIIKAVDRGVKTKILLTKNLLPRLKASKIIDYAKEGKLELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVW
IKDHRVVALFKEKFNEYWEKAEKV
>Mature_263_residues
SKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRSLEKKGFAMTQPGKTNKYRPVHPANVL
EKFIQDWQERVKEELEAKKKAKEELLELMAPLIETEVPKYGVERVWVVRGIKNSTLKTKEMLEEAQNEILLADDGFIAVN
LEDDIIKAVDRGVKTKILLTKNLLPRLKASKIIDYAKEGKLELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVWI
KDHRVVALFKEKFNEYWEKAEKV

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30607; Mature: 30476

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRSLEKKG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCC
FAMTQPGKTNKYRPVHPANVLEKFIQDWQERVKEELEAKKKAKEELLELMAPLIETEVPK
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGVERVWVVRGIKNSTLKTKEMLEEAQNEILLADDGFIAVNLEDDIIKAVDRGVKTKILL
CCHHHEEEEECCCCCCHHHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHHCCCCEEEEE
TKNLLPRLKASKIIDYAKEGKLELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVW
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEE
IKDHRVVALFKEKFNEYWEKAEKV
EECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRSLEKKG
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCC
FAMTQPGKTNKYRPVHPANVLEKFIQDWQERVKEELEAKKKAKEELLELMAPLIETEVPK
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGVERVWVVRGIKNSTLKTKEMLEEAQNEILLADDGFIAVNLEDDIIKAVDRGVKTKILL
CCHHHEEEEECCCCCCHHHHHHHHHHHCCEEEECCCEEEEECCHHHHHHHHCCCCEEEEE
TKNLLPRLKASKIIDYAKEGKLELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVW
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEE
IKDHRVVALFKEKFNEYWEKAEKV
EECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA