| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976826
Identifier: 18976826
GI number: 18976826
Start: 469587
End: 470699
Strand: Direct
Name: 18976826
Synonym: PF0454
Alternate gene names: NA
Gene position: 469587-470699 (Clockwise)
Preceding gene: 33359482
Following gene: 18976827
Centisome position: 24.61
GC content: 38.99
Gene sequence:
>1113_bases ATGGATTATGATGTTTTGATAATTGGTGGAGGACCAGTGGGTAACTATCTCGCATCTCTTTTAGCTGGAAAGCTCAGTGT AGCAGTAGTGGAGAGGAAAGGAAGTTTTGGAGGGAAGGCGTGCACTGGAATCATTGGGGCTGACAATTACGAAGCTCTTG GTTTTCCAGAAAAGGCCGTTTTGAATACCTTTAATGGTGCGTACTTTATCTCCAAGAAAAAATATTTTCACATAAGCAGA AAGACTCCACAAGCTTATCTTGTGGATAGAAAAATTTTAGAAAGAGAATTAGCAAAAAAGGCCATGAAAAAAGGAGCAGA GTATTATTTGGCAACGAATTTCCTAAAGTTTAAGAATGGGAAGGCTGTTCTTCAGCATCTTGATGGTAGAATGGAAATAG GAGCAAAGATTTATGTCGGGGCAGATGGAGTGAACAGTACGGTGGCAAAAGAAATAGGGGCAAAAACAGAGGGAGAAATC CTTAAAGGATGGGAAGTAGAGGTACTTGGTAATTTCAGGAGGAATTCAGTAGAAGTGTGGGTAAATAAGGACATAAACCC TGATTTCTTTTTCTGGGTTGCTCCCATAAATGAAGAAGTGGCTAGAGTTGGAACTTTTGGATCCGTTGATTCTTTAGCTA AGTTTCTCCAAATGAGGAAGCTTAAAGGAGGGCAGATTTTGGAATTTAAAACTGGAGCAGTAATATTGGGAATGAGAAAA CCTTGGGTTAAGGGAAATGTAGCTTTAGTTGGAGATGCTGCACTACAAATTAAACCCACTACTGCAGGAGGAATAGTTTT TGGGGCTCTCTGTGCAAGGGCTTTAGCTAAGGCTATCCTCAACAATAAATTGTCGAGTTATGAGAAAATGTGCTCTTGGG TTAAAGAGCAGATATCCTTTGGTCTTAGGATTAGAAAGGTATTCAAGTCATTAACACAAGACCACATAGAAGAGATATTC AACGTTCTAAGTTCAGAAGATGTGATAAGGCTTATTGAAGAGAGAGCTGATTTTGATGATCATGCAAAAACTGTAAAGGC TTTGCTCAAAAGCCCAAAAGTTTTAAGCAAGCTGATTAGAATTGCACCAATAATACTGAGAACATTAGTATGA
Upstream 100 bases:
>100_bases TCCCTCCTGTTATTATAGGAAGATGAGGCTAAAATAATTTTCTTCTCTAAGATACAAAGTTTTTATTGTTGAGGTTTAAT TAAGTTTAGGGGAGAGCATT
Downstream 100 bases:
>100_bases GGGATGAGAAATGGAATGGGAGATGGGGTTACAGGAAGAGTTCTTAGAGCTAATAAAGCTTAGAAAAAAGAAGATTGAGG GTAGGCTTTATGATGAAAAA
Product: bacteriochlorophyll synthase, 43 kDa subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MDYDVLIIGGGPVGNYLASLLAGKLSVAVVERKGSFGGKACTGIIGADNYEALGFPEKAVLNTFNGAYFISKKKYFHISR KTPQAYLVDRKILERELAKKAMKKGAEYYLATNFLKFKNGKAVLQHLDGRMEIGAKIYVGADGVNSTVAKEIGAKTEGEI LKGWEVEVLGNFRRNSVEVWVNKDINPDFFFWVAPINEEVARVGTFGSVDSLAKFLQMRKLKGGQILEFKTGAVILGMRK PWVKGNVALVGDAALQIKPTTAGGIVFGALCARALAKAILNNKLSSYEKMCSWVKEQISFGLRIRKVFKSLTQDHIEEIF NVLSSEDVIRLIEERADFDDHAKTVKALLKSPKVLSKLIRIAPIILRTLV
Sequences:
>Translated_370_residues MDYDVLIIGGGPVGNYLASLLAGKLSVAVVERKGSFGGKACTGIIGADNYEALGFPEKAVLNTFNGAYFISKKKYFHISR KTPQAYLVDRKILERELAKKAMKKGAEYYLATNFLKFKNGKAVLQHLDGRMEIGAKIYVGADGVNSTVAKEIGAKTEGEI LKGWEVEVLGNFRRNSVEVWVNKDINPDFFFWVAPINEEVARVGTFGSVDSLAKFLQMRKLKGGQILEFKTGAVILGMRK PWVKGNVALVGDAALQIKPTTAGGIVFGALCARALAKAILNNKLSSYEKMCSWVKEQISFGLRIRKVFKSLTQDHIEEIF NVLSSEDVIRLIEERADFDDHAKTVKALLKSPKVLSKLIRIAPIILRTLV >Mature_370_residues MDYDVLIIGGGPVGNYLASLLAGKLSVAVVERKGSFGGKACTGIIGADNYEALGFPEKAVLNTFNGAYFISKKKYFHISR KTPQAYLVDRKILERELAKKAMKKGAEYYLATNFLKFKNGKAVLQHLDGRMEIGAKIYVGADGVNSTVAKEIGAKTEGEI LKGWEVEVLGNFRRNSVEVWVNKDINPDFFFWVAPINEEVARVGTFGSVDSLAKFLQMRKLKGGQILEFKTGAVILGMRK PWVKGNVALVGDAALQIKPTTAGGIVFGALCARALAKAILNNKLSSYEKMCSWVKEQISFGLRIRKVFKSLTQDHIEEIF NVLSSEDVIRLIEERADFDDHAKTVKALLKSPKVLSKLIRIAPIILRTLV
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011777 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 40806; Mature: 40806
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYDVLIIGGGPVGNYLASLLAGKLSVAVVERKGSFGGKACTGIIGADNYEALGFPEKAV CCEEEEEECCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHH LNTFNGAYFISKKKYFHISRKTPQAYLVDRKILERELAKKAMKKGAEYYLATNFLKFKNG HHCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC KAVLQHLDGRMEIGAKIYVGADGVNSTVAKEIGAKTEGEILKGWEVEVLGNFRRNSVEVW HHHHHHCCCCEEECEEEEEECCCCCHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCEEEE VNKDINPDFFFWVAPINEEVARVGTFGSVDSLAKFLQMRKLKGGQILEFKTGAVILGMRK EECCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEECCC PWVKGNVALVGDAALQIKPTTAGGIVFGALCARALAKAILNNKLSSYEKMCSWVKEQISF CCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRIRKVFKSLTQDHIEEIFNVLSSEDVIRLIEERADFDDHAKTVKALLKSPKVLSKLIR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHH IAPIILRTLV HHHHHHHHCC >Mature Secondary Structure MDYDVLIIGGGPVGNYLASLLAGKLSVAVVERKGSFGGKACTGIIGADNYEALGFPEKAV CCEEEEEECCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHH LNTFNGAYFISKKKYFHISRKTPQAYLVDRKILERELAKKAMKKGAEYYLATNFLKFKNG HHCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC KAVLQHLDGRMEIGAKIYVGADGVNSTVAKEIGAKTEGEILKGWEVEVLGNFRRNSVEVW HHHHHHCCCCEEECEEEEEECCCCCHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCEEEE VNKDINPDFFFWVAPINEEVARVGTFGSVDSLAKFLQMRKLKGGQILEFKTGAVILGMRK EECCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEECCC PWVKGNVALVGDAALQIKPTTAGGIVFGALCARALAKAILNNKLSSYEKMCSWVKEQISF CCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRIRKVFKSLTQDHIEEIFNVLSSEDVIRLIEERADFDDHAKTVKALLKSPKVLSKLIR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHH IAPIILRTLV HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]