| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976631
Identifier: 18976631
GI number: 18976631
Start: 265619
End: 265921
Strand: Direct
Name: 18976631
Synonym: PF0259
Alternate gene names: NA
Gene position: 265619-265921 (Clockwise)
Preceding gene: 18976623
Following gene: 18976632
Centisome position: 13.92
GC content: 39.6
Gene sequence:
>303_bases ATGGCTGTAATCATCGAGTTTTCTCTTATTCCTTTGGGGGAAGTAAGTGTGAGTAAGTACATAGCAGAAGCTATAAAGCT TTTAGAGGAGAAAGGTGTTAAATATCAGTTAACCCCCATGGGGACAATTATTGAGGTCGGGAGTGTGGAGGAAGGGTTGA AGATTGTGGGGGAGGCTCATGAATTAATGTTTAAATTGGGAGTTAAGAGGGTTGTTACCCACATAAAGATTGATGATAGA AGGGATAAAGAGAGGAAAATGGAGGATAAGGTAAAATCTGTGATTGAGAAGGTGAAGAAATGA
Upstream 100 bases:
>100_bases CCAAATCTTAGCCTATCAATTTTGAACATACATAATTCCCCATCATGTGTTTGGATAAATCCTTTTAAGGTTTCCACATT ATATATCTCGGTGAAAGACT
Downstream 100 bases:
>100_bases AGGTATTAATCCTGGCTATTGATAGAGACAATGACTTTGGAGTAAAGGCCGGAGTTAATGGACCAGTTATAGGTAGAGAG AAGTGTCTAGATGCTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MAVIIEFSLIPLGEVSVSKYIAEAIKLLEEKGVKYQLTPMGTIIEVGSVEEGLKIVGEAHELMFKLGVKRVVTHIKIDDR RDKERKMEDKVKSVIEKVKK
Sequences:
>Translated_100_residues MAVIIEFSLIPLGEVSVSKYIAEAIKLLEEKGVKYQLTPMGTIIEVGSVEEGLKIVGEAHELMFKLGVKRVVTHIKIDDR RDKERKMEDKVKSVIEKVKK >Mature_99_residues AVIIEFSLIPLGEVSVSKYIAEAIKLLEEKGVKYQLTPMGTIIEVGSVEEGLKIVGEAHELMFKLGVKRVVTHIKIDDRR DKERKMEDKVKSVIEKVKK
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 11308; Mature: 11176
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIIEFSLIPLGEVSVSKYIAEAIKLLEEKGVKYQLTPMGTIIEVGSVEEGLKIVGEAH CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHH ELMFKLGVKRVVTHIKIDDRRDKERKMEDKVKSVIEKVKK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVIIEFSLIPLGEVSVSKYIAEAIKLLEEKGVKYQLTPMGTIIEVGSVEEGLKIVGEAH EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHH ELMFKLGVKRVVTHIKIDDRRDKERKMEDKVKSVIEKVKK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463; 12866058 [H]