Click here to switch to the map view.

The map label for this gene is 18976595

Identifier: 18976595

GI number: 18976595

Start: 238448

End: 239236

Strand: Direct

Name: 18976595

Synonym: PF0223

Alternate gene names: NA

Gene position: 238448-239236 (Clockwise)

Preceding gene: 33359459

Following gene: 18976597

Centisome position: 12.5

GC content: 39.04

Gene sequence:

>789_bases
ATGATAGAGCACCTCATTGCCACCGATGTTGGAAATAGAGGAGTTTCCAATTTCTATTTGAAGCTCAAGCATAACAATCC
TAACTATTTTGACAATGCATTAAGTTTGATTGAGAAAAATAAGGAGAAAGTATTGATAGTTTCCGCTTTTCCTATCCCTC
CTTTAATGATTCCTGAAACTGATGGTCCTCCAGGGGCTCTAGCTTTGGCTCTTGCCATAGAGGAAGTAGGGGGCAAGGCA
ATAATTCTAACAGAGGACATTGTGAAAGATGCCCTAAAATCTTTTTACAAAAATATAATAACAGAATTTCCTAAAGACCT
AAACTATTCTCTTTTAATAAGCATTGAGACCCCTGGGAGGAATAAAGAGGGCAAATACTACTCCTTTTCTGGTTTAGAAG
TTAATGTTAGACCTTACGATTCCCTCTTCATTGAAGGTAATAAGTTGGGAATACCGACAATCGGAATCGGCGATGGTGGA
AATGAGATTGGGATGGGGAACTTGGAATTATCTGGGAAATATTATTCTGTAGTAAAGACTACAGAGCTAATAGTGGCAGG
AGTGTCGAACTGGGGGGCTTATGGTTTGGTTGCAGCTCTTTCGATTATGGAAGGAAGAAACCTCCTAAGAGAATTTGACG
AGGAGGAGGTTGTTAAGGCACTCGTAAATGAGGGCCTTATTGATGGGATAACAAAAAGGCGAGAGTTAAGTGTGGATGGC
ATTCCACTATCCTTTCATAAAAAATTCATGGAGCTTTTGAATGCCCTTATTGAGATTAAAATTAAATGA

Upstream 100 bases:

>100_bases
TAATTCATAGGGAAGAAAACCCTACAAGGCTGTGGTGGGAATTAAAAGAGGCCATTAAAGGTAAGAAAGTAAAAATAGTG
GTATATGAGGTTGAAGATAA

Downstream 100 bases:

>100_bases
GTTCTTTCTTTAGTATATTTACAAACTCTTCTACAATTTTGTGCCTTTCCTGGGCAATCCTTTTCCCAGTCTCAGTGTAC
ATTAAATCCTTAAGCCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MIEHLIATDVGNRGVSNFYLKLKHNNPNYFDNALSLIEKNKEKVLIVSAFPIPPLMIPETDGPPGALALALAIEEVGGKA
IILTEDIVKDALKSFYKNIITEFPKDLNYSLLISIETPGRNKEGKYYSFSGLEVNVRPYDSLFIEGNKLGIPTIGIGDGG
NEIGMGNLELSGKYYSVVKTTELIVAGVSNWGAYGLVAALSIMEGRNLLREFDEEEVVKALVNEGLIDGITKRRELSVDG
IPLSFHKKFMELLNALIEIKIK

Sequences:

>Translated_262_residues
MIEHLIATDVGNRGVSNFYLKLKHNNPNYFDNALSLIEKNKEKVLIVSAFPIPPLMIPETDGPPGALALALAIEEVGGKA
IILTEDIVKDALKSFYKNIITEFPKDLNYSLLISIETPGRNKEGKYYSFSGLEVNVRPYDSLFIEGNKLGIPTIGIGDGG
NEIGMGNLELSGKYYSVVKTTELIVAGVSNWGAYGLVAALSIMEGRNLLREFDEEEVVKALVNEGLIDGITKRRELSVDG
IPLSFHKKFMELLNALIEIKIK
>Mature_262_residues
MIEHLIATDVGNRGVSNFYLKLKHNNPNYFDNALSLIEKNKEKVLIVSAFPIPPLMIPETDGPPGALALALAIEEVGGKA
IILTEDIVKDALKSFYKNIITEFPKDLNYSLLISIETPGRNKEGKYYSFSGLEVNVRPYDSLFIEGNKLGIPTIGIGDGG
NEIGMGNLELSGKYYSVVKTTELIVAGVSNWGAYGLVAALSIMEGRNLLREFDEEEVVKALVNEGLIDGITKRRELSVDG
IPLSFHKKFMELLNALIEIKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI156139133, Length=326, Percent_Identity=28.2208588957055, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI156139131, Length=326, Percent_Identity=28.2208588957055, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI156139129, Length=326, Percent_Identity=28.2208588957055, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI156139135, Length=326, Percent_Identity=28.2208588957055, Blast_Score=105, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28815; Mature: 28815

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHLIATDVGNRGVSNFYLKLKHNNPNYFDNALSLIEKNKEKVLIVSAFPIPPLMIPET
CCCHHEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCEECCCC
DGPPGALALALAIEEVGGKAIILTEDIVKDALKSFYKNIITEFPKDLNYSLLISIETPGR
CCCCHHHHHEEEHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC
NKEGKYYSFSGLEVNVRPYDSLFIEGNKLGIPTIGIGDGGNEIGMGNLELSGKYYSVVKT
CCCCCEEEECCCEEEECCCCEEEEECCEECCCEEEECCCCCCCCCCCEEECCCEEEEEEE
TELIVAGVSNWGAYGLVAALSIMEGRNLLREFDEEEVVKALVNEGLIDGITKRRELSVDG
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCC
IPLSFHKKFMELLNALIEIKIK
CCHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MIEHLIATDVGNRGVSNFYLKLKHNNPNYFDNALSLIEKNKEKVLIVSAFPIPPLMIPET
CCCHHEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCEECCCC
DGPPGALALALAIEEVGGKAIILTEDIVKDALKSFYKNIITEFPKDLNYSLLISIETPGR
CCCCHHHHHEEEHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC
NKEGKYYSFSGLEVNVRPYDSLFIEGNKLGIPTIGIGDGGNEIGMGNLELSGKYYSVVKT
CCCCCEEEECCCEEEECCCCEEEEECCEECCCEEEECCCCCCCCCCCEEECCCEEEEEEE
TELIVAGVSNWGAYGLVAALSIMEGRNLLREFDEEEVVKALVNEGLIDGITKRRELSVDG
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCC
IPLSFHKKFMELLNALIEIKIK
CCHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA