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The map label for this gene is rpl44e [H]

Identifier: 161484704

GI number: 161484704

Start: 234645

End: 234929

Strand: Direct

Name: rpl44e [H]

Synonym: PF0217

Alternate gene names: 161484704

Gene position: 234645-234929 (Clockwise)

Preceding gene: 18976585

Following gene: 18976590

Centisome position: 12.3

GC content: 43.86

Gene sequence:

>285_bases
ATGAAGTATCCAAAGCAAATAAGGACTTATTGCCCGTTTTGTAAGAAACACACAATCCACAAGGTAGAAAGAGTAAAAAA
GAGGCCGAGGAGTGAGCTTAGTGCAGGTCAGAGAAGGTTCAGGAGGATACTTAAGGGTTATGGAGGATTCCCAAGGCCCA
AGCCAGAGGGCAGAGAAAAGCCAGTTAAAAAGCTAGACTTGAGATTCAGATGCACTGAGTGTGGAAAAGCTCACACTAGA
GGAAGAGGATTTAGAGTAAAGAAGTTTGAGCTAGTGGAGGGATGA

Upstream 100 bases:

>100_bases
TTTAAATATTCGATCTCCACAAACCAATGCAAAACCGATCATCAAGCATGGCTCGGGGGTGTCCGGATAGGAGCCACCGG
GCCCTGTAGGAGGGATGAAA

Downstream 100 bases:

>100_bases
GCGAATGGCTAAGCCAATAATTCCAATGCCAAGATCAAGATTTCTAAGAGTGAAGTGCATTGACTGTGGAAATGAGCAGA
TAGTATTTAGCCATCCAGCA

Product: 50S ribosomal protein L44e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKYPKQIRTYCPFCKKHTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGKAHTR
GRGFRVKKFELVEG

Sequences:

>Translated_94_residues
MKYPKQIRTYCPFCKKHTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGKAHTR
GRGFRVKKFELVEG
>Mature_94_residues
MKYPKQIRTYCPFCKKHTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREKPVKKLDLRFRCTECGKAHTR
GRGFRVKKFELVEG

Specific function: Unknown

COG id: COG1631

COG function: function code J; Ribosomal protein L44E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L44e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000552
- InterPro:   IPR011332
- ProDom:   PD002841 [H]

Pfam domain/function: PF00935 Ribosomal_L44 [H]

EC number: NA

Molecular weight: Translated: 11201; Mature: 11201

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS01172 RIBOSOMAL_L44E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYPKQIRTYCPFCKKHTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREK
CCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PVKKLDLRFRCTECGKAHTRGRGFRVKKFELVEG
CHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKYPKQIRTYCPFCKKHTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREK
CCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PVKKLDLRFRCTECGKAHTRGRGFRVKKFELVEG
CHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]