| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yyzM [H]
Identifier: 18311625
GI number: 18311625
Start: 3016469
End: 3016681
Strand: Reverse
Name: yyzM [H]
Synonym: CPE2643
Alternate gene names: 18311625
Gene position: 3016681-3016469 (Counterclockwise)
Preceding gene: 18311626
Following gene: 18311624
Centisome position: 99.51
GC content: 28.17
Gene sequence:
>213_bases TTGATAAACAAATTTTATATTGGTGATATAGTTAAAATGAGGAAAGTACATCCTTGTGGAAGTGATGAGTGGGAAGTTAT AAGAGTTGGAGCTGATATTAAAATAAAATGTTTAGGATGTTCAAGAATTGTAATGATTCCTAGATCTAAATTCCAAAAGG GAGTAAAAAAGATTATAAAATCAAATGCTCCAGAGGAAGAAATTAATGAATAA
Upstream 100 bases:
>100_bases AAGAAAGAGAATAAAAATGACTCTTGATAAAAAGAAATATATGAAAGAAATAATTACAGGTTAATTTATATAAATTTTAT TTTAGAGGAGGTTATTTAAT
Downstream 100 bases:
>100_bases AATTTTAAAAAAATAAATTTATAAAAGTTATGTTTACATTAATAAAGAGGGTTGCAATAACCTTCTTTTAATGTTAGAAT ATTTAATTGTAATCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIKSNAPEEEINE
Sequences:
>Translated_70_residues MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIKSNAPEEEINE >Mature_70_residues MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIKSNAPEEEINE
Specific function: Unknown
COG id: COG4481
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009296 [H]
Pfam domain/function: PF06107 DUF951 [H]
EC number: NA
Molecular weight: Translated: 8019; Mature: 8019
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIK CCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHH SNAPEEEINE CCCCHHHCCC >Mature Secondary Structure MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIK CCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHH SNAPEEEINE CCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]