Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yyzM [H]

Identifier: 18311625

GI number: 18311625

Start: 3016469

End: 3016681

Strand: Reverse

Name: yyzM [H]

Synonym: CPE2643

Alternate gene names: 18311625

Gene position: 3016681-3016469 (Counterclockwise)

Preceding gene: 18311626

Following gene: 18311624

Centisome position: 99.51

GC content: 28.17

Gene sequence:

>213_bases
TTGATAAACAAATTTTATATTGGTGATATAGTTAAAATGAGGAAAGTACATCCTTGTGGAAGTGATGAGTGGGAAGTTAT
AAGAGTTGGAGCTGATATTAAAATAAAATGTTTAGGATGTTCAAGAATTGTAATGATTCCTAGATCTAAATTCCAAAAGG
GAGTAAAAAAGATTATAAAATCAAATGCTCCAGAGGAAGAAATTAATGAATAA

Upstream 100 bases:

>100_bases
AAGAAAGAGAATAAAAATGACTCTTGATAAAAAGAAATATATGAAAGAAATAATTACAGGTTAATTTATATAAATTTTAT
TTTAGAGGAGGTTATTTAAT

Downstream 100 bases:

>100_bases
AATTTTAAAAAAATAAATTTATAAAAGTTATGTTTACATTAATAAAGAGGGTTGCAATAACCTTCTTTTAATGTTAGAAT
ATTTAATTGTAATCCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIKSNAPEEEINE

Sequences:

>Translated_70_residues
MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIKSNAPEEEINE
>Mature_70_residues
MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIKSNAPEEEINE

Specific function: Unknown

COG id: COG4481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009296 [H]

Pfam domain/function: PF06107 DUF951 [H]

EC number: NA

Molecular weight: Translated: 8019; Mature: 8019

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIK
CCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHH
SNAPEEEINE
CCCCHHHCCC
>Mature Secondary Structure
MINKFYIGDIVKMRKVHPCGSDEWEVIRVGADIKIKCLGCSRIVMIPRSKFQKGVKKIIK
CCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHH
SNAPEEEINE
CCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]