The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is nudH [C]

Identifier: 18311603

GI number: 18311603

Start: 2996378

End: 2996677

Strand: Reverse

Name: nudH [C]

Synonym: CPE2621

Alternate gene names: 18311603

Gene position: 2996677-2996378 (Counterclockwise)

Preceding gene: 18311604

Following gene: 18311602

Centisome position: 98.85

GC content: 34.0

Gene sequence:

>300_bases
ATGGGATATATAATGGATTTAAGAAAAGAACTTCCTAATCCACATAGACCACTTATAATGTGTTCAGCTGGAATAATAAT
AATTGATAAAAAGGGAAGGGTATTATTACAAAAAAGAACTGACAATAATAAATGGGGGCTTCCTGGAGGAAGCTTAGAGC
TTGGAGAAAGTTTTGAGGAAGCTGCTATTAGAGAGGCATATGAAGAAGTGGGGCTTAGGGTTAAGAGTTTAACCTTGTTT
AATGTTTACTCTGGTAAAGAGTGTTACAATAAGTATCCTAATGGAGATGATAGTTTATAA

Upstream 100 bases:

>100_bases
ATAGCTTAAGATTATTTAATCTTAAGCTATTTTTTATTTTAGGGTATAATATTTTTAAATTAATTTAGAATAAAATTATG
TAATTTAAGAGGAGAATTTT

Downstream 100 bases:

>100_bases
CGCATCTTCTATATTTATTTCAAATGATTATGAAGGAAAAGTAGTCTTAGATGGAGAAGAAAGCGCAGATGCTGTATTTT
TTAAAAAGGTAGATATTCCT

Product: MutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MGYIMDLRKELPNPHRPLIMCSAGIIIIDKKGRVLLQKRTDNNKWGLPGGSLELGESFEEAAIREAYEEVGLRVKSLTLF
NVYSGKECYNKYPNGDDSL

Sequences:

>Translated_99_residues
MGYIMDLRKELPNPHRPLIMCSAGIIIIDKKGRVLLQKRTDNNKWGLPGGSLELGESFEEAAIREAYEEVGLRVKSLTLF
NVYSGKECYNKYPNGDDSL
>Mature_98_residues
GYIMDLRKELPNPHRPLIMCSAGIIIIDKKGRVLLQKRTDNNKWGLPGGSLELGESFEEAAIREAYEEVGLRVKSLTLFN
VYSGKECYNKYPNGDDSL

Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 11176; Mature: 11045

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYIMDLRKELPNPHRPLIMCSAGIIIIDKKGRVLLQKRTDNNKWGLPGGSLELGESFEE
CCCCHHHHHHCCCCCCCEEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
AAIREAYEEVGLRVKSLTLFNVYSGKECYNKYPNGDDSL
HHHHHHHHHHCCEEEEEEEEECCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
GYIMDLRKELPNPHRPLIMCSAGIIIIDKKGRVLLQKRTDNNKWGLPGGSLELGESFEE
CCCHHHHHHCCCCCCCEEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
AAIREAYEEVGLRVKSLTLFNVYSGKECYNKYPNGDDSL
HHHHHHHHHHCCEEEEEEEEECCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]