| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pbuO [H]
Identifier: 18311564
GI number: 18311564
Start: 2957466
End: 2958758
Strand: Direct
Name: pbuO [H]
Synonym: CPE2582
Alternate gene names: 18311564
Gene position: 2957466-2958758 (Clockwise)
Preceding gene: 18311556
Following gene: 18311565
Centisome position: 97.56
GC content: 30.39
Gene sequence:
>1293_bases ATGAATAACTTTTTTAAACTTAAAGAACATGAAACAAATATAAGAACAGAATTACTTGCTGGTCTTACCTCATTTTTTGC TGCAGTTTATATAATTGTAGTAAATGCTAGCATACTTAGTGATGGTGGAGTATCTATGGAACCACTTATAATAGCTACAG TATTAGCATCATTAATTGGATGTGTACTAGTTGCACTTTTAAGTAATGCTCCTCTTATTATAATGCCTGGTATGGGTATT AATGCACTATTTACTTATACCATAGTAAATACTATGGGACTTACATTCCAACAAGCTTTAGCAGCTGTTATAGTAGCTGG TATTTTGTTTATTGTGGTAGCGGTTACACCTTTAGCAGATATGTTAACTAGCTCAATACCAACCTCATTAAAAGAAGCAA TAACAGTTGGAATCGGTATTTTTATTACTTTCTTAGGATTACAAAAGGCTGGCTTAATAGTAGGAGATGCCTCAACACTT GTTAAATTAGGTGATATTTCATCTAAAGAAGTTATAGTATTCTTCATAACTATGATACTAATGCTAGTTTTATTTATAAA AGATGTACCAGGTTCATTCTTAATAGGAATTTTATCTGGAACAATTATATCAATGTTATTTGGAATTGTTGATTTATCAA ATTTTCAATTCTCATTACCTAATTTCAGTGAATATAAACAAGTTTTCTTATCAGCTAATTTTAGTGGAATAACTTCAATT TCATTTTGGATTGCAACCTTCTCACTAACTTTAGTCCTAGTATTTGAAAACATTGGTTTACTTCATGGACAAATTGATGG TATGTTAAAACAACCAAGTAAAAGACAAAGAGCTCTTAACGCTGTTGCCTTTACTACTATAATTTGTGGTATCTGTGGTA CTAGTCCTTCAGTTTCAACTGTAGAAGGTAGTGCAGGAATAGCAGCTGGTGGTAAAACAGGATTAACTTCTATATTTACA GGATTTTTATTTTTAATATCAATCTTCTTTATACCAGTTATATCACTTATTCCAAACTCAGCAATAGCTCCAGTCTTAAT AATAATTGGAGGCTTAATGATTCAAAATATAGTTTCAATAAACTTTGAAGACTTCACTGAATCATTCCCAGCATTCCTTA CTTTAACTATAATACCTTTAACATTTAGTATAGTTGATGGTATTGCTTTTGGATTTATAGCTTATCCTATTTGTAAGTTA GCAACAAAGAAGTATAAAGATGTATCTATCCCTATGTACGTTATATCAGCAATCTTTTTAGTATATTTTGTACTTCACGC TACACAAATATAG
Upstream 100 bases:
>100_bases TATTTAAAAAACCTTTATTAAACGTTTAACATATGATATAATAACATTTGCATCGATAGATGTGGGAGGGTGAGGGAGAT ATTTTTGAAAAGGAGAAAGG
Downstream 100 bases:
>100_bases CTTTAAATTATAAATTAAACTCCCTTATTAATATCAATAAGGGAGTTTTTTTATATACTGATTATATATATTAAATTAGG AGTTAATTTTATGGAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MNNFFKLKEHETNIRTELLAGLTSFFAAVYIIVVNASILSDGGVSMEPLIIATVLASLIGCVLVALLSNAPLIIMPGMGI NALFTYTIVNTMGLTFQQALAAVIVAGILFIVVAVTPLADMLTSSIPTSLKEAITVGIGIFITFLGLQKAGLIVGDASTL VKLGDISSKEVIVFFITMILMLVLFIKDVPGSFLIGILSGTIISMLFGIVDLSNFQFSLPNFSEYKQVFLSANFSGITSI SFWIATFSLTLVLVFENIGLLHGQIDGMLKQPSKRQRALNAVAFTTIICGICGTSPSVSTVEGSAGIAAGGKTGLTSIFT GFLFLISIFFIPVISLIPNSAIAPVLIIIGGLMIQNIVSINFEDFTESFPAFLTLTIIPLTFSIVDGIAFGFIAYPICKL ATKKYKDVSIPMYVISAIFLVYFVLHATQI
Sequences:
>Translated_430_residues MNNFFKLKEHETNIRTELLAGLTSFFAAVYIIVVNASILSDGGVSMEPLIIATVLASLIGCVLVALLSNAPLIIMPGMGI NALFTYTIVNTMGLTFQQALAAVIVAGILFIVVAVTPLADMLTSSIPTSLKEAITVGIGIFITFLGLQKAGLIVGDASTL VKLGDISSKEVIVFFITMILMLVLFIKDVPGSFLIGILSGTIISMLFGIVDLSNFQFSLPNFSEYKQVFLSANFSGITSI SFWIATFSLTLVLVFENIGLLHGQIDGMLKQPSKRQRALNAVAFTTIICGICGTSPSVSTVEGSAGIAAGGKTGLTSIFT GFLFLISIFFIPVISLIPNSAIAPVLIIIGGLMIQNIVSINFEDFTESFPAFLTLTIIPLTFSIVDGIAFGFIAYPICKL ATKKYKDVSIPMYVISAIFLVYFVLHATQI >Mature_430_residues MNNFFKLKEHETNIRTELLAGLTSFFAAVYIIVVNASILSDGGVSMEPLIIATVLASLIGCVLVALLSNAPLIIMPGMGI NALFTYTIVNTMGLTFQQALAAVIVAGILFIVVAVTPLADMLTSSIPTSLKEAITVGIGIFITFLGLQKAGLIVGDASTL VKLGDISSKEVIVFFITMILMLVLFIKDVPGSFLIGILSGTIISMLFGIVDLSNFQFSLPNFSEYKQVFLSANFSGITSI SFWIATFSLTLVLVFENIGLLHGQIDGMLKQPSKRQRALNAVAFTTIICGICGTSPSVSTVEGSAGIAAGGKTGLTSIFT GFLFLISIFFIPVISLIPNSAIAPVLIIIGGLMIQNIVSINFEDFTESFPAFLTLTIIPLTFSIVDGIAFGFIAYPICKL ATKKYKDVSIPMYVISAIFLVYFVLHATQI
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine. May work at purine concentrations higher than 100 uM [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=433, Percent_Identity=33.9491916859122, Blast_Score=252, Evalue=4e-68, Organism=Escherichia coli, GI1790150, Length=431, Percent_Identity=32.7146171693735, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI1790499, Length=436, Percent_Identity=28.6697247706422, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI48994909, Length=432, Percent_Identity=27.3148148148148, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45884; Mature: 45884
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFFKLKEHETNIRTELLAGLTSFFAAVYIIVVNASILSDGGVSMEPLIIATVLASLIG CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CVLVALLSNAPLIIMPGMGINALFTYTIVNTMGLTFQQALAAVIVAGILFIVVAVTPLAD HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLTSSIPTSLKEAITVGIGIFITFLGLQKAGLIVGDASTLVKLGDISSKEVIVFFITMIL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHEECCCCCCHHHHHHHHHHH MLVLFIKDVPGSFLIGILSGTIISMLFGIVDLSNFQFSLPNFSEYKQVFLSANFSGITSI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCHHHH SFWIATFSLTLVLVFENIGLLHGQIDGMLKQPSKRQRALNAVAFTTIICGICGTSPSVST HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE VEGSAGIAAGGKTGLTSIFTGFLFLISIFFIPVISLIPNSAIAPVLIIIGGLMIQNIVSI ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC NFEDFTESFPAFLTLTIIPLTFSIVDGIAFGFIAYPICKLATKKYKDVSIPMYVISAIFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VYFVLHATQI HHHHHHHHCC >Mature Secondary Structure MNNFFKLKEHETNIRTELLAGLTSFFAAVYIIVVNASILSDGGVSMEPLIIATVLASLIG CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CVLVALLSNAPLIIMPGMGINALFTYTIVNTMGLTFQQALAAVIVAGILFIVVAVTPLAD HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLTSSIPTSLKEAITVGIGIFITFLGLQKAGLIVGDASTLVKLGDISSKEVIVFFITMIL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHEECCCCCCHHHHHHHHHHH MLVLFIKDVPGSFLIGILSGTIISMLFGIVDLSNFQFSLPNFSEYKQVFLSANFSGITSI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCHHHH SFWIATFSLTLVLVFENIGLLHGQIDGMLKQPSKRQRALNAVAFTTIICGICGTSPSVST HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE VEGSAGIAAGGKTGLTSIFTGFLFLISIFFIPVISLIPNSAIAPVLIIIGGLMIQNIVSI ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC NFEDFTESFPAFLTLTIIPLTFSIVDGIAFGFIAYPICKLATKKYKDVSIPMYVISAIFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VYFVLHATQI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 11591660 [H]