| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is glnA [H]
Identifier: 18311551
GI number: 18311551
Start: 2940944
End: 2942845
Strand: Direct
Name: glnA [H]
Synonym: CPE2569
Alternate gene names: 18311551
Gene position: 2940944-2942845 (Clockwise)
Preceding gene: 18311541
Following gene: 18311556
Centisome position: 97.02
GC content: 29.86
Gene sequence:
>1902_bases ATGAATAAAGATTTATTATTTACAATTCCTAAGAAATATCATAATAAAGAAAGTTTAATTTCTATTTTTGAGGACCATCC TGAAATAAAATTTGTATCTTTAGTTGGGGTTGACTTAGCAGGTAATGATACTGACGAAAAAATTCCTTCTAAACTATTTT TAAAAGATATAGATTCTTTCCTTCATGGAACTGCCGTACAAACAGACGGTTCTTCAGTTGTCCTTCCAGGAATAGCAACT TTAAATAACGCAAAAGTGGATATGATTGCCGATTTAGATTGTAAGTGGTTTGTAGATTACAATTATGATTTTATAGACCC TTTAACTAATAGACCAGTAGGAACACTTAGAATTCCTTGTTTCTTAATCCATGAAGATAAAGCAGTGGACTCTAGACATA TATTAAAAAATTCAATTGACACATTCAAATCAAACATATTCTCATTATTAAAAAAATATCCTGAAACACTAAATGATTTA AATATAAAATTCGATGATATAGATGACCTTTTATTAACATCTGCAACAGAATTAGAATTTTGGGTAAAAACACCAAATGA TAAAGCTTTAATTGAAGAACTTTCAACTTCTGAAGTTTTACAAGAACAATATTGGACAAGAACTAAGGGTAATGTTAGAA CAGCCTTAGAACAAAGTTTATTATATATGGATGAATATGGATTTGAACCTGAAATGGGACACAAAGAGGTTGGTGGAGTT AAAGCTAAGCTTACTTCTTCAGGTCAATTTGATCATATAATGGAACAATTAGAAATAGACTGGAAATTCTCAGATGCTAT GCAAGCTGCAGATAATGAATTATTTATAAGAACATTAGTTAAAGAAACTTTTAGAAGAAACGGATTAGAAGTAACCTTCC TTGCTAAACCAATATCAGGAGTTGCTGGTAGTGGAGAACACACTCATTTAAGCTTAAGCTTAAAACTAAAAGATGGAAGA ATGATAAATTTATTTAATCCAACTAAAAATCATTTCTTAAGTAAAATAGGGTATGGTTCTATAATGGGTATATTAAAGAA CTACGAGGTAATGAATCCATTTATCTCAGCTACAACAGACTCATTAAAAAGATTAAAACCAGGATTTGAAGCTCCTGTTT GTATAGTTACATCTCTAGGTCAAAGCCCTGAAGTTCCATCTAGAAATAGAACTATATTAGCAGGTTTAATAAGAGATCCT CACAATCCTTTAGCTACTAGATTTGAACTTAGATCACCAAATCCATTTACAAATACTTATCTTTGTATAGCATCAAGCTA TATGGCTATGTTAGATGGTATTAAGTATGCTTTAGAAAATGATAAAACAGAAGATGATCTTTTAGCTGAATTATCTAAAA AACCTGGTGAAGAAGCAGATTACCTAGAAAAATCTAGAGCATATAGAAGTGAAGAAGATGTGTTTGAAGATTTCACAGAT TCACAAAGAGATGAATACTTTGGTGTGGCTCCTGCTACTGTTTTTGAAAACCTAAGTGCTTTTGATAAATACCCTGAAAA GGTAGATGTATTAAAAGTAAATTCAGTATTTACAGACAAGCTTATAAATAGTTTCAAAATGGCTACTACTAAGAGATGGA CTACAGAAATAACTTCAAGAATAATACCTTCTTACACAAAAGATATAAGAGCCGCTAAACAACTTCATTGTTGTGATAAA GCCTTAGATCTTGACGTATCAACTTGGATGACAATAAATGAATTAAGACATATAACAATGAAAGATTCTTATCACAGAAG AAGCTTATTTACTCAAATAAAGAATGCTATAAATGAATCTGATTTTGAAAAAGCTTCTGATTTACAAATAAAACTTGATA AAAACATGAGTGAATTAAATGACCTTTACTCAACTTACAAGAAAAATTTATTAGATATATAA
Upstream 100 bases:
>100_bases TACGTTTAAAATAACTATTAGTCATAAAAATGAAAGGATGTGAACAGAAGATTATTGCAATTATGTTAATTTATTATAAT TGTATTACTTCTAAATAATT
Downstream 100 bases:
>100_bases TAAAAAAAGAAATCAATGCTTTAAATTGATTTCTCATACTTTAAAGAAATGACCTTTGAAATTAACAAAGGTCATTTTAT ATTCTTATATTAATGATATG
Product: glutamine synthetase
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MNKDLLFTIPKKYHNKESLISIFEDHPEIKFVSLVGVDLAGNDTDEKIPSKLFLKDIDSFLHGTAVQTDGSSVVLPGIAT LNNAKVDMIADLDCKWFVDYNYDFIDPLTNRPVGTLRIPCFLIHEDKAVDSRHILKNSIDTFKSNIFSLLKKYPETLNDL NIKFDDIDDLLLTSATELEFWVKTPNDKALIEELSTSEVLQEQYWTRTKGNVRTALEQSLLYMDEYGFEPEMGHKEVGGV KAKLTSSGQFDHIMEQLEIDWKFSDAMQAADNELFIRTLVKETFRRNGLEVTFLAKPISGVAGSGEHTHLSLSLKLKDGR MINLFNPTKNHFLSKIGYGSIMGILKNYEVMNPFISATTDSLKRLKPGFEAPVCIVTSLGQSPEVPSRNRTILAGLIRDP HNPLATRFELRSPNPFTNTYLCIASSYMAMLDGIKYALENDKTEDDLLAELSKKPGEEADYLEKSRAYRSEEDVFEDFTD SQRDEYFGVAPATVFENLSAFDKYPEKVDVLKVNSVFTDKLINSFKMATTKRWTTEITSRIIPSYTKDIRAAKQLHCCDK ALDLDVSTWMTINELRHITMKDSYHRRSLFTQIKNAINESDFEKASDLQIKLDKNMSELNDLYSTYKKNLLDI
Sequences:
>Translated_633_residues MNKDLLFTIPKKYHNKESLISIFEDHPEIKFVSLVGVDLAGNDTDEKIPSKLFLKDIDSFLHGTAVQTDGSSVVLPGIAT LNNAKVDMIADLDCKWFVDYNYDFIDPLTNRPVGTLRIPCFLIHEDKAVDSRHILKNSIDTFKSNIFSLLKKYPETLNDL NIKFDDIDDLLLTSATELEFWVKTPNDKALIEELSTSEVLQEQYWTRTKGNVRTALEQSLLYMDEYGFEPEMGHKEVGGV KAKLTSSGQFDHIMEQLEIDWKFSDAMQAADNELFIRTLVKETFRRNGLEVTFLAKPISGVAGSGEHTHLSLSLKLKDGR MINLFNPTKNHFLSKIGYGSIMGILKNYEVMNPFISATTDSLKRLKPGFEAPVCIVTSLGQSPEVPSRNRTILAGLIRDP HNPLATRFELRSPNPFTNTYLCIASSYMAMLDGIKYALENDKTEDDLLAELSKKPGEEADYLEKSRAYRSEEDVFEDFTD SQRDEYFGVAPATVFENLSAFDKYPEKVDVLKVNSVFTDKLINSFKMATTKRWTTEITSRIIPSYTKDIRAAKQLHCCDK ALDLDVSTWMTINELRHITMKDSYHRRSLFTQIKNAINESDFEKASDLQIKLDKNMSELNDLYSTYKKNLLDI >Mature_633_residues MNKDLLFTIPKKYHNKESLISIFEDHPEIKFVSLVGVDLAGNDTDEKIPSKLFLKDIDSFLHGTAVQTDGSSVVLPGIAT LNNAKVDMIADLDCKWFVDYNYDFIDPLTNRPVGTLRIPCFLIHEDKAVDSRHILKNSIDTFKSNIFSLLKKYPETLNDL NIKFDDIDDLLLTSATELEFWVKTPNDKALIEELSTSEVLQEQYWTRTKGNVRTALEQSLLYMDEYGFEPEMGHKEVGGV KAKLTSSGQFDHIMEQLEIDWKFSDAMQAADNELFIRTLVKETFRRNGLEVTFLAKPISGVAGSGEHTHLSLSLKLKDGR MINLFNPTKNHFLSKIGYGSIMGILKNYEVMNPFISATTDSLKRLKPGFEAPVCIVTSLGQSPEVPSRNRTILAGLIRDP HNPLATRFELRSPNPFTNTYLCIASSYMAMLDGIKYALENDKTEDDLLAELSKKPGEEADYLEKSRAYRSEEDVFEDFTD SQRDEYFGVAPATVFENLSAFDKYPEKVDVLKVNSVFTDKLINSFKMATTKRWTTEITSRIIPSYTKDIRAAKQLHCCDK ALDLDVSTWMTINELRHITMKDSYHRRSLFTQIKNAINESDFEKASDLQIKLDKNMSELNDLYSTYKKNLLDI
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=471, Percent_Identity=28.6624203821656, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 72107; Mature: 72107
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDLLFTIPKKYHNKESLISIFEDHPEIKFVSLVGVDLAGNDTDEKIPSKLFLKDIDSF CCCCEEEECCHHHCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH LHGTAVQTDGSSVVLPGIATLNNAKVDMIADLDCKWFVDYNYDFIDPLTNRPVGTLRIPC HCCCEEECCCCEEEECCCEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEE FLIHEDKAVDSRHILKNSIDTFKSNIFSLLKKYPETLNDLNIKFDDIDDLLLTSATELEF EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHCCCCCEEE WVKTPNDKALIEELSTSEVLQEQYWTRTKGNVRTALEQSLLYMDEYGFEPEMGHKEVGGV EEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCE KAKLTSSGQFDHIMEQLEIDWKFSDAMQAADNELFIRTLVKETFRRNGLEVTFLAKPISG EEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC VAGSGEHTHLSLSLKLKDGRMINLFNPTKNHFLSKIGYGSIMGILKNYEVMNPFISATTD CCCCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHH SLKRLKPGFEAPVCIVTSLGQSPEVPSRNRTILAGLIRDPHNPLATRFELRSPNPFTNTY HHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCHH LCIASSYMAMLDGIKYALENDKTEDDLLAELSKKPGEEADYLEKSRAYRSEEDVFEDFTD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCC SQRDEYFGVAPATVFENLSAFDKYPEKVDVLKVNSVFTDKLINSFKMATTKRWTTEITSR CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IIPSYTKDIRAAKQLHCCDKALDLDVSTWMTINELRHITMKDSYHRRSLFTQIKNAINES HHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHCHH DFEKASDLQIKLDKNMSELNDLYSTYKKNLLDI HCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKDLLFTIPKKYHNKESLISIFEDHPEIKFVSLVGVDLAGNDTDEKIPSKLFLKDIDSF CCCCEEEECCHHHCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH LHGTAVQTDGSSVVLPGIATLNNAKVDMIADLDCKWFVDYNYDFIDPLTNRPVGTLRIPC HCCCEEECCCCEEEECCCEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEE FLIHEDKAVDSRHILKNSIDTFKSNIFSLLKKYPETLNDLNIKFDDIDDLLLTSATELEF EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHCCCCCEEE WVKTPNDKALIEELSTSEVLQEQYWTRTKGNVRTALEQSLLYMDEYGFEPEMGHKEVGGV EEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCE KAKLTSSGQFDHIMEQLEIDWKFSDAMQAADNELFIRTLVKETFRRNGLEVTFLAKPISG EEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC VAGSGEHTHLSLSLKLKDGRMINLFNPTKNHFLSKIGYGSIMGILKNYEVMNPFISATTD CCCCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHH SLKRLKPGFEAPVCIVTSLGQSPEVPSRNRTILAGLIRDPHNPLATRFELRSPNPFTNTY HHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCHH LCIASSYMAMLDGIKYALENDKTEDDLLAELSKKPGEEADYLEKSRAYRSEEDVFEDFTD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCC SQRDEYFGVAPATVFENLSAFDKYPEKVDVLKVNSVFTDKLINSFKMATTKRWTTEITSR CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IIPSYTKDIRAAKQLHCCDKALDLDVSTWMTINELRHITMKDSYHRRSLFTQIKNAINES HHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHCHH DFEKASDLQIKLDKNMSELNDLYSTYKKNLLDI HCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2891680; 1981087 [H]