Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is prsA [H]

Identifier: 18311465

GI number: 18311465

Start: 2841241

End: 2842269

Strand: Reverse

Name: prsA [H]

Synonym: CPE2483

Alternate gene names: 18311465

Gene position: 2842269-2841241 (Counterclockwise)

Preceding gene: 18311466

Following gene: 18311464

Centisome position: 93.76

GC content: 30.13

Gene sequence:

>1029_bases
ATGGTAAGTGTAAAAAAAATAGTCGCATCTGCACTAGTGGGAGTTTTAATGTTTAGTGCTGTTGGGTGTAATATGGTAGA
AAAAACTCAAGCCGCTATTGATAAGACGACTGTAGCTACAGTTAACGGAGAGAAAATAACTTTAGGAGAGGTTGATTCAC
ATTTAAAAGGAGTCTTTGCTCAAATGAAAAGCCAATATGGTGATAAATATATGGATGACCCTCAAGTTGCACAACAAATA
TTACAACAAAGACAAAGTGTAGTACAGGGCTTAGTAACTGACAAAGTTTTAGGAATCGAAGCTGATAAATTAGGAATAAA
ACCATCAGAAGAAGAGATTAAGAAAAAAGTAGATGAGCAATTTGAGAATATCAAAAAAGGAATGGGAGATAACTTTGATA
AAGCTTTAGAGGCTGAAGGATATACAGAAGATACATTCAAAGATGTAATAAAAAATCAAGTTATAAATCAAGCCGTTCAA
GATTATATTATTAAAGATGTAAAGGTAACTGATGAGGATGCACAAAAATACTATGATGAGAATAAACAACAGTTTGTAGC
TAAGGATTCTGGAGTTCTTACAAAACACTTATTATTTGAAAATGAAGAAGAAGCTCAAAAAGCTTATGATGAAATTCAAT
CAGGAAAAACAACATTCAATGATTTATTTACAAAATATCAAAATAATAAATCAGAGAATAAGAAACCTATAGCAGAAAAC
TTAGGAGTAGTACCTGCAGAAAACTCAGGATTAGTTCAAGAGTTTGTAGATGGATTAAAACCATTAAAAGAAGGAGAAAT
ATCTAAGCCTATAAAAACTCAATTTGGATATCATATAATTCAAGCTGGAGCTACTTATGAAAAAGGAGCACAGTTACCAT
TTGATGAGGTTAAATCACAAATAATACAAATTTTAAAACAACAAAAAGATTCAGAGAAATTTAAAGCTGATATGGATCAA
TGGAAAAAAGATTTAAATGTTAAAGTTTATGATGATAAATTACAAGAAGGTTTAAAAATAAGCAAATAG

Upstream 100 bases:

>100_bases
TAATTTATAAATTGAAATATTACTGTAACATTGATATACTAAAATAGAATTTGACTAGAATATTATGTAAATTTTAATAG
GAGAAAGGCGAGGTATTAGA

Downstream 100 bases:

>100_bases
TTTTTATTAAGACTTATGGAAGTTATTCCATAAGTCTTTTTTTTAGAGTTTTTTAAGAGATATTTTCTTAAATTGGCTAT
TAAATTTAAAGATGACATAA

Product: peptidylprolyl isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQI
LQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQ
DYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN
LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKADMDQ
WKKDLNVKVYDDKLQEGLKISK

Sequences:

>Translated_342_residues
MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQI
LQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQ
DYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN
LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKADMDQ
WKKDLNVKVYDDKLQEGLKISK
>Mature_342_residues
MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQI
LQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQ
DYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN
LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKADMDQ
WKKDLNVKVYDDKLQEGLKISK

Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PpiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023059
- InterPro:   IPR000297
- InterPro:   IPR015391
- InterPro:   IPR008880 [H]

Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 38422; Mature: 38422

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHH
QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH
FENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDE
HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
NKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN
HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHH
LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQ
CCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHCHHHHHCCCCHHCCCCCCHHHHHHH
IIQILKQQKDSEKFKADMDQWKKDLNVKVYDDKLQEGLKISK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCC
>Mature Secondary Structure
MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHH
QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH
FENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDE
HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
NKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN
HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHH
LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQ
CCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHCHHHHHCCCCHHCCCCCCHHHHHHH
IIQILKQQKDSEKFKADMDQWKKDLNVKVYDDKLQEGLKISK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA