| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is fhs [H]
Identifier: 18311451
GI number: 18311451
Start: 2825121
End: 2826791
Strand: Reverse
Name: fhs [H]
Synonym: CPE2469
Alternate gene names: 18311451
Gene position: 2826791-2825121 (Counterclockwise)
Preceding gene: 18311452
Following gene: 18311450
Centisome position: 93.25
GC content: 31.36
Gene sequence:
>1671_bases ATGAAAAATGATATTGAAATAGCACAAAGTGCTAAAATGGAGCCAATAATAAATATTGCTAAAAAAATAGGTCTTGGAGA AGATGATATTGAGCTTTATGGAAAATATAAATGTAAGATATCTTTAGATGCAATAAAAAAACTAGAAAATAATAAGGATG GTAAGCTTGTTTTAGTTACAGCTATAAATCCAACACCGGCAGGAGAGGGAAAATCTACTGTTACAGTAGGATTAGGACAA GCGTTAAATAAAATAGGAAAAAATACTGTTATAGCCTTAAGAGAGCCATCATTAGGACCTGTATTTGGAATAAAAGGTGG AGCAGCTGGTGGTGGATATGCTCAAGTAGTTCCTATGGAAGATATAAATCTTCATTTTACAGGGGATATGCATGCAATAA CTTCAGCTAATAATCTTTTATGTGCAGCTATAGATAACCATATTCATCAAGGTAATTTATTAAGAATAGATTCAAGAAGA ATTGTATTTAAAAGAGTTATGGATATGAATGATAGAGCCTTAAGAAATATAGTTGTTGGAATGGGTGGTAAAATAAACGG ATTCTTAAGAGAAGATGGATTTATGATCACTGTTGCATCAGAAATAATGGCTATATTATGTATGGCTAGTGATTTAGAAG ACTTAAAAGAGAGAATGGGAAATATTTTAATTGCATATAACTTAGATGGAGAGCCTGTTTATGCTAAGGAATTAGAAGTT CAAGGAGCTATGGCTTTACTTATGAAAGATGCCATAAAACCTAACCTTGTTCAAACTTTAGAAAATACTCCAGCAATAAT TCATGGAGGCCCATTTGCCAATATAGCTCATGGATGTAATTCAATAATAGCAACTAAGACAGCTTTAAAAATGAGTGATA TAACTATAACAGAAGCTGGTTTTGGAGCAGATTTAGGTGCAGAAAAATTCTTAGATATAAAATGTAGATACGGAAATTTA AATCCTGATTGTGTAGTTTTAGTAGCTACTATAAGAGCTTTAAAACATCACGGTGGAGTAAAGAAAGATGAATTAAATAT ATCAAATGTAGATGCTTTAAATAAAGGAATGAAAAACTTAGAAAAGCAAATAGAAAATATAAAAGCTTATGGAGTACCAG TTGTTGTTGCTATAAATAAGTTTATAACTGATTCAGATGAAGAGGTTAAAGCTATAGAAGACTTCTGCAAAAATATAGGA GTAGAAGTTAGCTTAACAGAAGTATGGGAAAAAGGTGGAGAAGGCGGAATTGATTTAGCTAATAAAGTTATAAAAACAAT GGAAACCGAGCCTTCAAACTTTAAGATGATTTACGATTCAGAAGAATCAATAAAGGATAAAATACTAAAAATAGTTCAAA CTATATATGGCGGAAAAGGAGTAAACTATACTCCTCAAGCTCTTAAACAAATAGCTGAAATTGAGAAATTTAATTTAGAT AAGCTTCCAATATGTATGGCTAAAACACAGTATTCATTATCAGATAATCCAAGTCTTTTAGGAAGACCTGAAAACTTTGA TATAACTGTTAAAGAGGTTAGAGTTTCAAATGGAGCTGGATTCATAGTTGTTTTAACAGGGGATGTTATGACAATGCCAG GGTTACCTAAAGTTCCTGCTGCTAATAGAATGGATATAAAAGACAATGGAGAAATCGTAGGATTATTCTAA
Upstream 100 bases:
>100_bases TTTTTATAAAATATATAAAAATGTTCGATAAAACTCTTTGTTTTTTAATAAATTATGGGTATAATATTAAGTAGATTACT TTGGAATGAGGTGCGGAATT
Downstream 100 bases:
>100_bases ATGTTTAGATAATTTTGAGGCTTATATGACGCTGTTAAAAAAATAGTCATATAAGCCTTTTTTTATTTAAAAACTAGTAA TTGTAATTGCTTGACAAATG
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MKNDIEIAQSAKMEPIINIAKKIGLGEDDIELYGKYKCKISLDAIKKLENNKDGKLVLVTAINPTPAGEGKSTVTVGLGQ ALNKIGKNTVIALREPSLGPVFGIKGGAAGGGYAQVVPMEDINLHFTGDMHAITSANNLLCAAIDNHIHQGNLLRIDSRR IVFKRVMDMNDRALRNIVVGMGGKINGFLREDGFMITVASEIMAILCMASDLEDLKERMGNILIAYNLDGEPVYAKELEV QGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSIIATKTALKMSDITITEAGFGADLGAEKFLDIKCRYGNL NPDCVVLVATIRALKHHGGVKKDELNISNVDALNKGMKNLEKQIENIKAYGVPVVVAINKFITDSDEEVKAIEDFCKNIG VEVSLTEVWEKGGEGGIDLANKVIKTMETEPSNFKMIYDSEESIKDKILKIVQTIYGGKGVNYTPQALKQIAEIEKFNLD KLPICMAKTQYSLSDNPSLLGRPENFDITVKEVRVSNGAGFIVVLTGDVMTMPGLPKVPAANRMDIKDNGEIVGLF
Sequences:
>Translated_556_residues MKNDIEIAQSAKMEPIINIAKKIGLGEDDIELYGKYKCKISLDAIKKLENNKDGKLVLVTAINPTPAGEGKSTVTVGLGQ ALNKIGKNTVIALREPSLGPVFGIKGGAAGGGYAQVVPMEDINLHFTGDMHAITSANNLLCAAIDNHIHQGNLLRIDSRR IVFKRVMDMNDRALRNIVVGMGGKINGFLREDGFMITVASEIMAILCMASDLEDLKERMGNILIAYNLDGEPVYAKELEV QGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSIIATKTALKMSDITITEAGFGADLGAEKFLDIKCRYGNL NPDCVVLVATIRALKHHGGVKKDELNISNVDALNKGMKNLEKQIENIKAYGVPVVVAINKFITDSDEEVKAIEDFCKNIG VEVSLTEVWEKGGEGGIDLANKVIKTMETEPSNFKMIYDSEESIKDKILKIVQTIYGGKGVNYTPQALKQIAEIEKFNLD KLPICMAKTQYSLSDNPSLLGRPENFDITVKEVRVSNGAGFIVVLTGDVMTMPGLPKVPAANRMDIKDNGEIVGLF >Mature_556_residues MKNDIEIAQSAKMEPIINIAKKIGLGEDDIELYGKYKCKISLDAIKKLENNKDGKLVLVTAINPTPAGEGKSTVTVGLGQ ALNKIGKNTVIALREPSLGPVFGIKGGAAGGGYAQVVPMEDINLHFTGDMHAITSANNLLCAAIDNHIHQGNLLRIDSRR IVFKRVMDMNDRALRNIVVGMGGKINGFLREDGFMITVASEIMAILCMASDLEDLKERMGNILIAYNLDGEPVYAKELEV QGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSIIATKTALKMSDITITEAGFGADLGAEKFLDIKCRYGNL NPDCVVLVATIRALKHHGGVKKDELNISNVDALNKGMKNLEKQIENIKAYGVPVVVAINKFITDSDEEVKAIEDFCKNIG VEVSLTEVWEKGGEGGIDLANKVIKTMETEPSNFKMIYDSEESIKDKILKIVQTIYGGKGVNYTPQALKQIAEIEKFNLD KLPICMAKTQYSLSDNPSLLGRPENFDITVKEVRVSNGAGFIVVLTGDVMTMPGLPKVPAANRMDIKDNGEIVGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=623, Percent_Identity=43.9807383627608, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI36796743, Length=619, Percent_Identity=44.4264943457189, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI310124614, Length=84, Percent_Identity=44.047619047619, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17568737, Length=623, Percent_Identity=42.215088282504, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17568739, Length=623, Percent_Identity=42.215088282504, Blast_Score=449, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6319558, Length=631, Percent_Identity=43.2646592709984, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=42.1725239616613, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI62472483, Length=620, Percent_Identity=41.7741935483871, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI45551871, Length=620, Percent_Identity=41.7741935483871, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI24645718, Length=620, Percent_Identity=41.7741935483871, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI17137370, Length=620, Percent_Identity=41.7741935483871, Blast_Score=449, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 60254; Mature: 60254
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00721 FTHFS_1 ; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDIEIAQSAKMEPIINIAKKIGLGEDDIELYGKYKCKISLDAIKKLENNKDGKLVLVT CCCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEEEEEEEHHHHHHHCCCCCCCEEEEE AINPTPAGEGKSTVTVGLGQALNKIGKNTVIALREPSLGPVFGIKGGAAGGGYAQVVPME EECCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEEC DINLHFTGDMHAITSANNLLCAAIDNHIHQGNLLRIDSRRIVFKRVMDMNDRALRNIVVG CCEEEECCCEEEECCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHCC MGGKINGFLREDGFMITVASEIMAILCMASDLEDLKERMGNILIAYNLDGEPVYAKELEV CCCCCCEEEECCCEEEEEHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCEEHHHHHH QGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSIIATKTALKMSDITITEAG HHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECEEEEECC FGADLGAEKFLDIKCRYGNLNPDCVVLVATIRALKHHGGVKKDELNISNVDALNKGMKNL CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH EKQIENIKAYGVPVVVAINKFITDSDEEVKAIEDFCKNIGVEVSLTEVWEKGGEGGIDLA HHHHHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHH NKVIKTMETEPSNFKMIYDSEESIKDKILKIVQTIYGGKGVNYTPQALKQIAEIEKFNLD HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC KLPICMAKTQYSLSDNPSLLGRPENFDITVKEVRVSNGAGFIVVLTGDVMTMPGLPKVPA CCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEECCCCCCCCC ANRMDIKDNGEIVGLF CCCCEECCCCCEEEEC >Mature Secondary Structure MKNDIEIAQSAKMEPIINIAKKIGLGEDDIELYGKYKCKISLDAIKKLENNKDGKLVLVT CCCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEEEEEEEHHHHHHHCCCCCCCEEEEE AINPTPAGEGKSTVTVGLGQALNKIGKNTVIALREPSLGPVFGIKGGAAGGGYAQVVPME EECCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEEC DINLHFTGDMHAITSANNLLCAAIDNHIHQGNLLRIDSRRIVFKRVMDMNDRALRNIVVG CCEEEECCCEEEECCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHCC MGGKINGFLREDGFMITVASEIMAILCMASDLEDLKERMGNILIAYNLDGEPVYAKELEV CCCCCCEEEECCCEEEEEHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCEEHHHHHH QGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSIIATKTALKMSDITITEAG HHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECEEEEECC FGADLGAEKFLDIKCRYGNLNPDCVVLVATIRALKHHGGVKKDELNISNVDALNKGMKNL CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH EKQIENIKAYGVPVVVAINKFITDSDEEVKAIEDFCKNIGVEVSLTEVWEKGGEGGIDLA HHHHHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHH NKVIKTMETEPSNFKMIYDSEESIKDKILKIVQTIYGGKGVNYTPQALKQIAEIEKFNLD HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC KLPICMAKTQYSLSDNPSLLGRPENFDITVKEVRVSNGAGFIVVLTGDVMTMPGLPKVPA CCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEECCCCCCCCC ANRMDIKDNGEIVGLF CCCCEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA