| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311425
Identifier: 18311425
GI number: 18311425
Start: 2791734
End: 2792333
Strand: Reverse
Name: 18311425
Synonym: CPE2443
Alternate gene names: NA
Gene position: 2792333-2791734 (Counterclockwise)
Preceding gene: 18311426
Following gene: 18311424
Centisome position: 92.11
GC content: 26.0
Gene sequence:
>600_bases ATGAAACAAGGGCAGATATTTTTAAGGCTTTGCTTATGGTATTGCTTAAGTAATTTATGGGAGTTGAAAATTTTGCTTTG TGAGAGTTGTAATAAAAATAATGCAACAATACAATTATTAAAAAGTACTAAGGGAAAAAAAGAAAGCTTAATGCTTTGTG ATAAATGTGCAATCGAAATAATGAGCCTTGCACTAGAAGATGAGGAGATAAATTTAGAAGATTTTTTATTAGATTTAAAT ACTTATATAGAGTGCATTGAAGAGAGGGTTAAGGATAAAGCTTTAGTATGTAAAAATTGTGGAACAAGATTTTCTGATTT TGAAGAAAATAATTTTTTAGGCTGTGAAAAATGCTATGAGATATTTAAAAATAGGATAATATTTTTATTAAATTTAGAAG AAGCAGAGATAAAGCATAGAGGGAAACAACCTAAAACAATAAAAAAGGACTTAAAGAAATTAGAAATCTTAAATTTACAA GAAAAATTAAAAATTAATATACTGAAAGAGGAATATGAAGAAGCTATTATTACTAAGAAAAAAATACATGATTTAAAAGA GAGTATAAGGGAGGATAGTAATAGTGGTTCAATGGATTAG
Upstream 100 bases:
>100_bases GTAGATAATTTACTTGAACATAATATCATAGATGAGAAAGCAGCAAATCTTACTAAGGTTGCAATAAATGATAGAACCCT TCAGAGTTCTAAGAATATAA
Downstream 100 bases:
>100_bases CCCCTTAGATAATAGTATAGTAATTGCATCAAAAGTTAAAATCTTAAGAAACATAAAAGGAATTAAATTCACTAAGCTAT TAAATGAAGAGGAATTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: UVR Domain Protein; Modulator Of CtsR Repression Protein; ClpC ATPase; Modulator Of Heat Shock Repressor CtsR McsA; Activator Of Protein Kinase McsB; UvrB/UvrC Domain-Containing Protein; DNA Repair Protein; UvrB/UvrC Motif-Containing Protein; Modulator Of CtsR Repression McsA; UVR Domain-Containing Protein; YacH Protein; UvrB/UvrC Motif Domain Family Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEIMSLALEDEEINLEDFLLDLN TYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYEIFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQ EKLKINILKEEYEEAIITKKKIHDLKESIREDSNSGSMD
Sequences:
>Translated_199_residues MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEIMSLALEDEEINLEDFLLDLN TYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYEIFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQ EKLKINILKEEYEEAIITKKKIHDLKESIREDSNSGSMD >Mature_199_residues MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEIMSLALEDEEINLEDFLLDLN TYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYEIFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQ EKLKINILKEEYEEAIITKKKIHDLKESIREDSNSGSMD
Specific function: Unknown
COG id: COG3880
COG function: function code S; Uncharacterized protein with conserved CXXC pairs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23351; Mature: 23351
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHH MSLALEDEEINLEDFLLDLNTYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH IFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQEKLKINILKEEYEEAIITKK HHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH KIHDLKESIREDSNSGSMD HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHH MSLALEDEEINLEDFLLDLNTYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH IFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQEKLKINILKEEYEEAIITKK HHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH KIHDLKESIREDSNSGSMD HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA