| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311413
Identifier: 18311413
GI number: 18311413
Start: 2779966
End: 2780367
Strand: Direct
Name: 18311413
Synonym: CPE2431
Alternate gene names: NA
Gene position: 2779966-2780367 (Clockwise)
Preceding gene: 18311348
Following gene: 18311418
Centisome position: 91.7
GC content: 31.09
Gene sequence:
>402_bases ATGAAGGACGTAATTTTTGACGATTTTCAAAATAGCGTTAATAATTCTTTACTTAGACACAAAAGCATATTAGATATATT GAGTAAATATCAAGAATCTCAAGCAAGAGCTAGCAGAGCTATATGCAAAGCCGTTACAAATTGCGGTTGCATAGAGATTT GTGCTAAAAAACAGAATATGCTAGAGGATACTGACCTATCCTTAGAAGAACTTAATCCACGCTTAAGTTCTCATATAAAA GGTGACTTATGCGAAAATTGCAGAGAAGTTATAGAACGTGAACTTGGAAATAATCTCTTCTATTTAACTTCACTATGCAA TGCACTGGATCTAAACCTATTTGATATCTTATTAAAAGAATATAACAAAATGGATACTTTAGGTAAGTTTACTTTTAGAT AA
Upstream 100 bases:
>100_bases CATATATTTAGTTTTGCAACCTAAATCATTTGACAAATATAACCAAAAAATTCTATAATTACTATAGGGTCAAAGATTAG TATATAAGGAGTGAAACACT
Downstream 100 bases:
>100_bases ATATTAAGTGCCATATTTATATGGCACTTCTTTTTATAAATTTTTATTTAAAGCAACTTGTTCTCTTATTCTTCTTAATC CATTTTTTATCGCTCTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKDVIFDDFQNSVNNSLLRHKSILDILSKYQESQARASRAICKAVTNCGCIEICAKKQNMLEDTDLSLEELNPRLSSHIK GDLCENCREVIERELGNNLFYLTSLCNALDLNLFDILLKEYNKMDTLGKFTFR
Sequences:
>Translated_133_residues MKDVIFDDFQNSVNNSLLRHKSILDILSKYQESQARASRAICKAVTNCGCIEICAKKQNMLEDTDLSLEELNPRLSSHIK GDLCENCREVIERELGNNLFYLTSLCNALDLNLFDILLKEYNKMDTLGKFTFR >Mature_133_residues MKDVIFDDFQNSVNNSLLRHKSILDILSKYQESQARASRAICKAVTNCGCIEICAKKQNMLEDTDLSLEELNPRLSSHIK GDLCENCREVIERELGNNLFYLTSLCNALDLNLFDILLKEYNKMDTLGKFTFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15286; Mature: 15286
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDVIFDDFQNSVNNSLLRHKSILDILSKYQESQARASRAICKAVTNCGCIEICAKKQNM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LEDTDLSLEELNPRLSSHIKGDLCENCREVIERELGNNLFYLTSLCNALDLNLFDILLKE HCCCCCCHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH YNKMDTLGKFTFR HHHHHHHHHCCCC >Mature Secondary Structure MKDVIFDDFQNSVNNSLLRHKSILDILSKYQESQARASRAICKAVTNCGCIEICAKKQNM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LEDTDLSLEELNPRLSSHIKGDLCENCREVIERELGNNLFYLTSLCNALDLNLFDILLKE HCCCCCCHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH YNKMDTLGKFTFR HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA