| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is secE
Identifier: 18311401
GI number: 18311401
Start: 2768720
End: 2768944
Strand: Reverse
Name: secE
Synonym: CPE2419
Alternate gene names: NA
Gene position: 2768944-2768720 (Counterclockwise)
Preceding gene: 18311402
Following gene: 18311400
Centisome position: 91.34
GC content: 32.0
Gene sequence:
>225_bases ATGGCTGCAAAGCAAAATGTAAATGAAAAAAGCAGAGGCTTTGGTATAACAAAGTTCTTTAGAGGGGTTAAGGCTGAAAT CAAAAGAATAACTTGGCCACCAAAAGAAGAAGCTAAAAAGGCCATTATTGCAGTAATTGTATTTACTGTAATATCTATTG CTTTAATAGGAGTAATGGATTTTGTATTTAAGAACCTCTTTGAGTTAGTGTTTGGACTTAAATAA
Upstream 100 bases:
>100_bases ACTGCAAATTCTGTAAGACTCATACTCTTCACAGAGAAACTAAGTAGTGTTTTGGATAGAAAATTCTAATGCATTATTAT GGTGTTAAGGATGTGAATTT
Downstream 100 bases:
>100_bases TATAAGGGAGGTTTGGTGATTTATTCACCGGTATGATATGAGTGATAGAGCTAGATGGTACGTAGTACACACATATTCAG GATACGAAAATAAAGTTAAA
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MAAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMDFVFKNLFELVFGLK
Sequences:
>Translated_74_residues MAAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMDFVFKNLFELVFGLK >Mature_73_residues AAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMDFVFKNLFELVFGLK
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8344; Mature: 8213
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMD CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVFKNLFELVFGLK HHHHHHHHHHHCCC >Mature Secondary Structure AAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMD CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVFKNLFELVFGLK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA