| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is yyaC [H]
Identifier: 18311161
GI number: 18311161
Start: 2501696
End: 2502226
Strand: Direct
Name: yyaC [H]
Synonym: CPE2179
Alternate gene names: 18311161
Gene position: 2501696-2502226 (Clockwise)
Preceding gene: 18311158
Following gene: 18311187
Centisome position: 82.53
GC content: 27.68
Gene sequence:
>531_bases TTGAATAAAATAAAAATTTACTACAAAAATTATTTGGCATATTACGAGATTTCAAATTTTTTAAAAAATCATATAGATGA AAAAACCATTATAGTATGTATAGGAACTGATAAATGTATAGGTGATTGCTTAGGTCCATTAGTTGGTACCCTATTAAAAG AAAAATTCTTTCCTTTAAAAGTATTTGGTACACTTGATTCTCCTATACATGCTCTTAATCTTGATAAAAAAATAACTGAA ATATTAAAAACTTATCCTGGTTATAAAATACTAGCCATAGATGCTTGCCTAGGAGATTCTAACTCTATCGGTGAAATTCA TGCTAGAAATGAACCTATTCACCCTGGAAAGGGCGTTGGCAAATCCTTAAGAAGTGTTGGAGATATGTCTATAATAGCTA TAGTTGATTCCTCAGAAAATATAGACCTATTTACAAGTAGACCAATTAGGTTAAGCTTTATATTAGATATGTCTAAAGTT ATTGTAGATTCTTTAATTCACTCCTACTATTTAAAAAACAAAAAAAATTAA
Upstream 100 bases:
>100_bases TATTCACCTCCATTTTAATAATTACCATCTAAAATCTTTTTTATACTTCCATTTAATATTTCTAACACTTCCTTCATATA ATTAATGAGGAGGTGAAACC
Downstream 100 bases:
>100_bases CTATATATCTCTTAATATTAAGAGATATATAGTTAATTTTACTCATCAATTAATTTTACTTCTAAATCATCTATACCTAA ATTTAATTTTTCAAATGTTT
Product: putative sporulation protein YyaC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNKIKIYYKNYLAYYEISNFLKNHIDEKTIIVCIGTDKCIGDCLGPLVGTLLKEKFFPLKVFGTLDSPIHALNLDKKITE ILKTYPGYKILAIDACLGDSNSIGEIHARNEPIHPGKGVGKSLRSVGDMSIIAIVDSSENIDLFTSRPIRLSFILDMSKV IVDSLIHSYYLKNKKN
Sequences:
>Translated_176_residues MNKIKIYYKNYLAYYEISNFLKNHIDEKTIIVCIGTDKCIGDCLGPLVGTLLKEKFFPLKVFGTLDSPIHALNLDKKITE ILKTYPGYKILAIDACLGDSNSIGEIHARNEPIHPGKGVGKSLRSVGDMSIIAIVDSSENIDLFTSRPIRLSFILDMSKV IVDSLIHSYYLKNKKN >Mature_176_residues MNKIKIYYKNYLAYYEISNFLKNHIDEKTIIVCIGTDKCIGDCLGPLVGTLLKEKFFPLKVFGTLDSPIHALNLDKKITE ILKTYPGYKILAIDACLGDSNSIGEIHARNEPIHPGKGVGKSLRSVGDMSIIAIVDSSENIDLFTSRPIRLSFILDMSKV IVDSLIHSYYLKNKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009665 - InterPro: IPR000671 [H]
Pfam domain/function: PF06866 DUF1256 [H]
EC number: NA
Molecular weight: Translated: 19724; Mature: 19724
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIKIYYKNYLAYYEISNFLKNHIDEKTIIVCIGTDKCIGDCLGPLVGTLLKEKFFPLK CCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE VFGTLDSPIHALNLDKKITEILKTYPGYKILAIDACLGDSNSIGEIHARNEPIHPGKGVG EEECCCCCCHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCHH KSLRSVGDMSIIAIVDSSENIDLFTSRPIRLSFILDMSKVIVDSLIHSYYLKNKKN HHHHHCCCEEEEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKIKIYYKNYLAYYEISNFLKNHIDEKTIIVCIGTDKCIGDCLGPLVGTLLKEKFFPLK CCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE VFGTLDSPIHALNLDKKITEILKTYPGYKILAIDACLGDSNSIGEIHARNEPIHPGKGVG EEECCCCCCHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCHH KSLRSVGDMSIIAIVDSSENIDLFTSRPIRLSFILDMSKVIVDSLIHSYYLKNKKN HHHHHCCCEEEEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377 [H]