| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311160
Identifier: 18311160
GI number: 18311160
Start: 2500946
End: 2501590
Strand: Reverse
Name: 18311160
Synonym: CPE2178
Alternate gene names: NA
Gene position: 2501590-2500946 (Counterclockwise)
Preceding gene: 18311162
Following gene: 161485642
Centisome position: 82.52
GC content: 23.88
Gene sequence:
>645_bases ATGAATAAAGGGCCTTTAAGTTTTTTAGTACTATTTTTTACTACATTAATAATTGGAACAATGACGTATTTTGTCAACTT AAATTATGAAGAAGCTAAATTAAAAGCAGAGAGTGTAAAAAGTCAAAAGAATGAAATTTTAAATATTAATGAAGAGGAAA ATGGACAAAAGGCTATAGAAAACAATAAAGAAGAGTTAAAAGAAGATAGAGAAAAAGAGAATATAAGTGAGAATAACAAT AAGCAAAGTAATGATTTAGATAAATCTCAATTAAAAGAAGAAAAAGAAATAGAAGGTAAGTCTAAAGAAAATGCTACAAA TATCAAAAAAAATGAAAAGTCTAAAGAAAAGGTAGCTGAGGAGAAATCATCAAAAGAAAGCAAAGAAGTATTTAAAGTAG ATAAATATTCAATTCCTAAAAAGATAAATAAAGCAGATAAGTTTAAATTAATGTCTATTGCTAAGAATTTATCTTTAACT GATTACGGGGTTTTATTAGAGCATATTAAGAGAAATGATGAGTTAGATGCTGCTATTGATATATTTAAAATACTTAAGGA TAAATTAGAAGAGAAAGAATATAAAGAAATGAAAGATATATTAAGTCCATACATAAATATTGAGTTAATTGAAGAGAAAA TATAA
Upstream 100 bases:
>100_bases CACCTCCTCATTAATTATATGAAGGAAGTGTTAGAAATATTAAATGGAAGTATAAAAAAGATTTTAGATGGTAATTATTA AAATGGAGGTGAATATACTT
Downstream 100 bases:
>100_bases ATGAAAAAAGAAGTAAAATAAAGAAATTGAGAGGAATTTAAAAATAGATTAACATAATGTTTGAAAATAGCCTAAAATTG AGTTTGAAATAAAAAGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIENNKEELKEDREKENISENNN KQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAEEKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLT DYGVLLEHIKRNDELDAAIDIFKILKDKLEEKEYKEMKDILSPYINIELIEEKI
Sequences:
>Translated_214_residues MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIENNKEELKEDREKENISENNN KQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAEEKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLT DYGVLLEHIKRNDELDAAIDIFKILKDKLEEKEYKEMKDILSPYINIELIEEKI >Mature_214_residues MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIENNKEELKEDREKENISENNN KQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAEEKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLT DYGVLLEHIKRNDELDAAIDIFKILKDKLEEKEYKEMKDILSPYINIELIEEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24915; Mature: 24915
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIE CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH NNKEELKEDREKENISENNNKQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAE CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH EKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLTDYGVLLEHIKRNDELDAAID HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH IFKILKDKLEEKEYKEMKDILSPYINIELIEEKI HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure MNKGPLSFLVLFFTTLIIGTMTYFVNLNYEEAKLKAESVKSQKNEILNINEEENGQKAIE CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH NNKEELKEDREKENISENNNKQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAE CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH EKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSLTDYGVLLEHIKRNDELDAAID HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH IFKILKDKLEEKEYKEMKDILSPYINIELIEEKI HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA